RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 SPACA3Q8IXA5 215 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 ZADH2Q8N4Q0 377 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 OR51G1Q8NGK1 321 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 PRR7Q8TB68 274 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 ZDHHC16Q969W1 377 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 TAAR6Q96RI8 345 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 HIST1H2BLQ99880 126 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 ACTR3CQ9C0K3 210 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 INO80CQ6PI98 192 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 ZNF826PQ6ZT77 177 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 KLF14Q8TD94 323 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 GATAD1Q8WUU5 269 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 NINJ1Q92982 152 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 PACRGQ96M98 296 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 OBP2BQ9NPH6 170 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 H7BYZ3 331 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 BTNL3Q6UXE8 466 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 ACP7Q6ZNF0 438 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 Q6ZR03 302 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 TMEM183AQ8IXX5 376 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 OR4F5Q8NH21 305 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 MRGPRDQ8TDS7 321 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 RAB24Q969Q5 203 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 OR4F4Q96R69 305 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 BSNQ9UPA5 3926 aa13.68□□□□□ -0.22
CLCNKA-203ENST00000439316 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 LYZL6O75951 148 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GALR1P47211 349 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GNB2P62879 340 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 IGFL3Q6UXB1 125 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 ZNF66Q6ZN08 573 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 H2BFWTQ7Z2G1 175 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 CXorf67Q86X51 503 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 CXXC4Q9H2H0 198 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GAB2Q9UQC2 676 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 CHD8Q9HCK8 2581 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 WISP2O76076 250 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 HRASP01112 189 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GZMHP20718 246 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GABRA2P47869 451 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 TLE1Q04724 770 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GAMTQ14353 236 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 OR5B12Q96R08 314 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 DIRC2Q96SL1 478 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 CLCF1Q9UBD9 225 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 NCOR2Q9Y618 2525 aa13.67□□□□□ -0.22
CLCNKA-203ENST00000439316 GTF3C1Q12789 2109 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 LINC00473A8K010 186 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 K7EM74 188 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 HOXA4Q00056 320 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 COL10A1Q03692 680 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 COA6Q5JTJ3 125 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 WDR82Q6UXN9 313 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 ZNF709Q8N972 641 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 NECAP1Q8NC96 275 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 OR5R1Q8NH85 324 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 ANAPC16Q96DE5 110 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 NEIL1Q96FI4 390 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 LURAP1Q96LR2 239 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 HSD17B10Q99714 261 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 USF3Q68DE3 2245 aa13.66□□□□□ -0.22
CLCNKA-203ENST00000439316 SMCO3A2RU48 225 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 C17orf112F2Z3M2 114 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 IGHG3P01860 377 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 GYPAP02724 150 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 TFF1P04155 84 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 SSTR5P35346 364 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 RPS16P62249 146 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 DEFA6Q01524 100 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 Q6ZT83 130 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 Q8N7P7 452 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 WDR31Q8NA23 367 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 ELOVL1Q9BW60 279 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 C15orf62A8K5M9 175 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 PAGE4O60829 102 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 VENTXO95231 258 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 GPX4P36969 197 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 GUSBP1Q15486 140 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 Q3ZCU0 254 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 PRAMEF6Q5VXH4 476 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 GCNT2Q8N0V5 402 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 OR1P1Q8NH06 330 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
CLCNKA-203ENST00000439316 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 PPP5D1E7EU14 171 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 IFNL4K9M1U5 179 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 IGKV3-15P01624 115 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 TUBG1P23258 451 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 CDC34P49427 236 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 FAM3BP58499 235 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 ACOT6Q3I5F7 207 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 AARDQ4LEZ3 155 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 SPINK9Q5DT21 86 aa13.64□□□□□ -0.23
CLCNKA-203ENST00000439316 RNASEH2CQ8TDP1 164 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms