RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 DEFA6Q01524 100 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 FOXE3Q13461 319 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 CDK10Q15131 360 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 PLGLAQ15195 96 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 DEFB136Q30KP8 78 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 SAMD5Q5TGI4 173 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 OVCH2Q7RTZ1 564 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 COMMD1Q8N668 190 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 SECTM1Q8WVN6 248 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 GIMAP1Q8WWP7 306 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 HARBI1Q96MB7 349 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 ABHD1Q96SE0 405 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 TSNAXQ99598 290 aaKnown RBP10.35□□□□□ -0.75
LINC00399-201ENST00000439008 IFT46Q9NQC8 304 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 NECAP2Q9NVZ3 263 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 TAS2R8Q9NYW2 309 aa10.35□□□□□ -0.75
LINC00399-201ENST00000439008 H3BMQ9 156 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 TNFSF12O43508 249 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 WIPF1O43516 503 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 FCGR3BO75015 233 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 SPDEFO95238 335 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 ELANEP08246 267 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 VDAC1P21796 283 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 TMBIM6P55061 237 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 FXYD4P59646 89 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 ECSCRQ19T08 205 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 BEAN1Q3B7T3 259 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 RNASE12Q5GAN4 147 aaKnown RBP10.34□□□□□ -0.75
LINC00399-201ENST00000439008 ASPHD1Q5U4P2 390 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 DHRS11Q6UWP2 260 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 ZNF562Q6V9R5 426 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 ZNF818PQ6ZRF7 136 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 LAX1Q8IWV1 398 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 RAX2Q96IS3 184 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 ADTRPQ96IZ2 230 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 GNB4Q9HAV0 340 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 EHFQ9NZC4 300 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 CEPT1Q9Y6K0 416 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 A3GALT2U3KPV4 340 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 DNAH3Q8TD57 4116 aa10.34□□□□□ -0.75
LINC00399-201ENST00000439008 SHOXO15266 292 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 PF4V1P10720 104 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 HLA-DMAP28067 261 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 GNRHRP30968 328 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 HRH1P35367 487 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 LGALS7P47929 136 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 DYRK1AQ13627 763 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 RTL8BQ17RB0 113 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 MZT2AQ6P582 158 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 KCTD9Q7L273 389 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 PPP1R27Q86WC6 154 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 ZNF695Q8IW36 515 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 MRPL41Q8IXM3 137 aaKnown RBP10.33□□□□□ -0.76
LINC00399-201ENST00000439008 VKORC1L1Q8N0U8 176 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 MFSD4AQ8N468 514 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 LFNGQ8NES3 379 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 OR52I2Q8NH67 350 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 RAB2BQ8WUD1 216 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 ISOC1Q96CN7 298 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 P2RX4Q99571 388 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 SLC5A7Q9GZV3 580 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 ZFP57Q9NU63 452 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 EXTL2Q9UBQ6 330 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 KLK11Q9UBX7 282 aa10.33□□□□□ -0.76
LINC00399-201ENST00000439008 FAM25AB3EWG3 89 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 FAM25CB3EWG5 89 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 FAM25GB3EWG6 89 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 RAMP3O60896 148 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 PRB2P02812 416 aaPredicted RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 SAA1P0DJI8 122 aaPredicted RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 RRASP10301 218 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 IGLL1P15814 213 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 CDX1P47902 265 aaPredicted RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 UBE2KP61086 200 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 TAGLNQ01995 201 aaKnown RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 FXYD3Q14802 87 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 CXorf66Q5JRM2 361 aaPredicted RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 TMEM17Q86X19 198 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 GRPEL2Q8TAA5 225 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 TCTEX1D2Q8WW35 142 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 ZNF2Q9BSG1 426 aaPredicted RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 GON7Q9BXV9 100 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 SLIRPQ9GZT3 109 aaKnown RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 FXYD6Q9H0Q3 95 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 RBM38Q9H0Z9 239 aaKnown RBP10.32□□□□□ -0.76
LINC00399-201ENST00000439008 ADAM30Q9UKF2 790 aa10.32□□□□□ -0.76
LINC00399-201ENST00000439008 SMIM31A0A1B0GVY4 71 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 A0A1W2PN81 502 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 NUDT19A8MXV4 375 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 RBMXL2O75526 392 aaKnown RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 SLC22A5O76082 557 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 CHRNA7P36544 502 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 RAB9AP51151 201 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 GNB1P62873 340 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 DGCR2P98153 550 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms