RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 HIPK2Q9H2X6 1198 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
ACTN1-204ENST00000438964 ABCA1O95477 2261 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 A0A1W2PPV4 95 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 C20orf202A1L168 122 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-204ENST00000438964 CLDN15P56746 228 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 GUSBP11Q6P575 273 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 C17orf82Q86X59 251 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-204ENST00000438964 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 OR8I2Q8N0Y5 310 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 RFESDQ8TAC1 157 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 OCIAD1Q9NX40 245 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 DEGS1O15121 323 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 MLNRO43193 412 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 CD27P26842 260 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 SIGLECL1Q8N7X8 197 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 OR10D3Q8NH80 312 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
ACTN1-204ENST00000438964 GNB4Q9HAV0 340 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 IGLV3-32A0A0A0MS00 114 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 C17orf98A8MV24 154 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 K7EN84 100 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 M0QZ24 198 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 LINC00614P0C842 121 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 ARF1P84077 181 aaKnown RBP11.24□□□□□ -0.61
ACTN1-204ENST00000438964 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 OR52L2PQ8NGH6 319 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 STARD4Q96DR4 205 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-204ENST00000438964 TIMP3P35625 211 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
ACTN1-204ENST00000438964 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 MRPL54Q6P161 138 aaKnown RBP11.24□□□□□ -0.61
ACTN1-204ENST00000438964 OR10G8Q8NGN5 311 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 ZC2HC1AQ96GY0 325 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 C20orf144Q9BQM9 153 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 ZFP30Q9Y2G7 519 aa11.24□□□□□ -0.61
ACTN1-204ENST00000438964 VAMP5O95183 116 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 GAGE1Q13065 139 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 FAM58AQ8N1B3 248 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 RNF138Q8WVD3 245 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 APH1AQ96BI3 265 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 C5orf30Q96GV9 206 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 PRDM6Q9NQX0 595 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 ACTL6BO94805 426 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 GLB1P16278 677 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
ACTN1-204ENST00000438964 LCN2P80188 198 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 DOLPP1Q86YN1 238 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 NAT8BQ9UHF3 227 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 RARRES3Q9UL19 164 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 LAMA5O15230 3695 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 HCFC1P51610 2035 aa11.23□□□□□ -0.61
ACTN1-204ENST00000438964 ZNF716A6NP11 495 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 C2CD4DB7Z1M9 353 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 FOXH1O75593 365 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 HNRNPA3P51991 378 aaKnown RBP11.22□□□□□ -0.61
ACTN1-204ENST00000438964 FBXW9Q5XUX1 488 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
ACTN1-204ENST00000438964 YTHDF2Q9Y5A9 579 aaKnown RBP11.22□□□□□ -0.61
ACTN1-204ENST00000438964 CTXN2P0C2S0 81 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 DSCR4P56555 118 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-204ENST00000438964 RBX1P62877 108 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 CEACAM21Q3KPI0 293 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 ALKBH2Q6NS38 261 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 SYT13Q7L8C5 426 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
ACTN1-204ENST00000438964 HYPMO75409 117 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 DKK1O94907 266 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 LSM10Q969L4 123 aaKnown RBP11.22□□□□□ -0.61
ACTN1-204ENST00000438964 WIPI2Q9Y4P8 454 aa11.22□□□□□ -0.61
ACTN1-204ENST00000438964 CADP27708 2225 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 A0A1W2PQM1 296 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 NXPH1P58417 271 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.61
ACTN1-204ENST00000438964 RAC1P63000 192 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 C3AR1Q16581 482 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 TRIM61Q5EBN2 209 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 LYG1Q8N1E2 194 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 CPT1CQ8TCG5 803 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 FAM122AQ96E09 287 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 ROS1P08922 2347 aa11.21□□□□□ -0.61
ACTN1-204ENST00000438964 VENTXO95231 258 aa11.21□□□□□ -0.62
ACTN1-204ENST00000438964 CCL7P80098 99 aa11.21□□□□□ -0.62
ACTN1-204ENST00000438964 WDR74Q6RFH5 385 aaPredicted RBP11.21□□□□□ -0.62
ACTN1-204ENST00000438964 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.62
ACTN1-204ENST00000438964 C19orf25Q9UFG5 118 aaPredicted RBP11.21□□□□□ -0.62
ACTN1-204ENST00000438964 IGLV3-12A0A075B6K2 115 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 CBY3A6NI87 242 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 LRRC30A6NM36 301 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 PMS2P5A8MQ11 134 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 OR2H2O95918 312 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms