RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 IFT46Q9NQC8 304 aa13.92□□□□□ -0.18
NCSTN-208ENST00000438008 MEIS3P1A6NDR6 274 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 SRRM4A7MD48 611 aaKnown RBP13.91□□□□□ -0.18
NCSTN-208ENST00000438008 HPGDSO60760 199 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 PPYP01298 95 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 ELK1P19419 428 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 CD33P20138 364 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 TMEM267Q0VDI3 215 aaPredicted RBP13.91□□□□□ -0.18
NCSTN-208ENST00000438008 KIAA0141Q14154 515 aaPredicted RBP13.91□□□□□ -0.18
NCSTN-208ENST00000438008 BEAN1Q3B7T3 259 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 C1QL4Q86Z23 238 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 LINC00482Q8N8I6 264 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 OSR1Q8TAX0 266 aaPredicted RBP13.91□□□□□ -0.18
NCSTN-208ENST00000438008 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
NCSTN-208ENST00000438008 TPSG1Q9NRR2 321 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 PRELID3BQ9Y3B1 194 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 NOTCH1P46531 2555 aa13.91□□□□□ -0.18
NCSTN-208ENST00000438008 PLXNB1O43157 2135 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 CRYZL1O95825 349 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 FCER2P06734 321 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 RPL30P62888 115 aaKnown RBP13.9□□□□□ -0.18
NCSTN-208ENST00000438008 ECSCRQ19T08 205 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 OXLD1Q5BKU9 147 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 TMEM65Q6PI78 240 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 ZNF66Q6ZN08 573 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 KCTD9Q7L273 389 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 MRPL41Q8IXM3 137 aaKnown RBP13.9□□□□□ -0.18
NCSTN-208ENST00000438008 TEX45Q8NA69 505 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 ZBTB34Q8NCN2 500 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 GPX8Q8TED1 209 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 P2RX4Q99571 388 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 BCL7BQ9BQE9 202 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 KLK15Q9H2R5 256 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 SCPEP1Q9HB40 452 aa13.9□□□□□ -0.18
NCSTN-208ENST00000438008 FOXA2Q9Y261 457 aaPredicted RBP13.9□□□□□ -0.18
NCSTN-208ENST00000438008 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
NCSTN-208ENST00000438008 WIPF1O43516 503 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 FCGR3BO75015 233 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
NCSTN-208ENST00000438008 RAB9AP51151 201 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 TAS2R46P59540 309 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 UBE2KP61086 200 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 SSBP2P81877 361 aaPredicted RBP13.89□□□□□ -0.19
NCSTN-208ENST00000438008 FXYD3Q14802 87 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 VMA21Q3ZAQ7 101 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 DHRS11Q6UWP2 260 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 ZNF491Q8N8L2 437 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 ABHD5Q8WTS1 349 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 RAB2BQ8WUD1 216 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 C4orf3Q8WVX3 66 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 ARPC1AQ92747 370 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 RCC1LQ96I51 464 aaKnown RBP13.89□□□□□ -0.19
NCSTN-208ENST00000438008 UBE2E2Q96LR5 201 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 CCL28Q9NRJ3 127 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 ADAM30Q9UKF2 790 aa13.89□□□□□ -0.19
NCSTN-208ENST00000438008 MRPS7Q9Y2R9 242 aaKnown RBP13.89□□□□□ -0.19
NCSTN-208ENST00000438008 A0A1W2PN81 502 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 SULT1C2O00338 296 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 SOX15O60248 233 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 TPPPO94811 219 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 CHRNA7P36544 502 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 TMBIM6P55061 237 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 PJVKQ0ZLH3 352 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 DYRK1AQ13627 763 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 MRGPRG-AS1Q2M3A8 158 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 CLVS1Q8IUQ0 354 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-208ENST00000438008 MFSD4AQ8N468 514 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 OR5M8Q8NGP6 311 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 SECTM1Q8WVN6 248 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 RAX2Q96IS3 184 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
NCSTN-208ENST00000438008 EHFQ9NZC4 300 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 A3GALT2U3KPV4 340 aa13.88□□□□□ -0.19
NCSTN-208ENST00000438008 CCL24O00175 119 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 DUS4LO95620 317 aaKnown RBP13.87□□□□□ -0.19
NCSTN-208ENST00000438008 IGLL1P15814 213 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 RFX2P48378 723 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 BRWD1-AS2P59051 145 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 RUNX1Q01196 453 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 SPCS2Q15005 226 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 ACTBL2Q562R1 376 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 PYHIN1Q6K0P9 492 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 UNQ5815/PRO19632Q6UWF5 114 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 LYSMD2Q8IV50 215 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 LFNGQ8NES3 379 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 OR5H2Q8NGV7 314 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 TCTEX1D2Q8WW35 142 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 TMEM68Q96MH6 324 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 SLC5A7Q9GZV3 580 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 TAS2R8Q9NYW2 309 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 VSIG4Q9Y279 399 aa13.87□□□□□ -0.19
NCSTN-208ENST00000438008 FAM25AB3EWG3 89 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 FAM25CB3EWG5 89 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 FAM25GB3EWG6 89 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 CNIH1O95406 144 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 PMP2P02689 132 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 KIR2DS2P43631 304 aa13.86□□□□□ -0.19
NCSTN-208ENST00000438008 PRSS8Q16651 343 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms