RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RHOVQ96L33 236 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 TMEM68Q96MH6 324 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 CITED4Q96RK1 184 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 SPATA25Q9BR10 227 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 AGMATQ9BSE5 352 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 CCDC90BQ9GZT6 254 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 LPAR5Q9H1C0 372 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 FKBP14Q9NWM8 211 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 TPRKBQ9Y3C4 175 aa5.96□□□□□ -1.46
VPS50-203ENST00000436177 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 A0A075B6Q4 140 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 A0A0A6YYD4 124 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 DENRO43583 198 aaKnown RBP5.95□□□□□ -1.46
VPS50-203ENST00000436177 IGLV1-51P01701 117 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 RRASP10301 218 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 CALRP27797 417 aaKnown RBP5.95□□□□□ -1.46
VPS50-203ENST00000436177 QRFPP83859 136 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 TPBGQ13641 420 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 OGFRL1Q5TC84 451 aaPredicted RBP5.95□□□□□ -1.46
VPS50-203ENST00000436177 Q8N402 240 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 BVESQ8NE79 360 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 OR9G4Q8NGQ1 327 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 ACOT12Q8WYK0 555 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 SNAPC3Q92966 411 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 USMG5Q96IX5 58 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 ADTRPQ96IZ2 230 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 TM2D3Q9BRN9 247 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 CENPOQ9BU64 300 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 PECRQ9BY49 303 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 PEMTQ9UBM1 199 aa5.95□□□□□ -1.46
VPS50-203ENST00000436177 AK6Q9Y3D8 172 aaKnown RBP5.95□□□□□ -1.46
VPS50-203ENST00000436177 LCE6AA0A183 80 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 PDCD5O14737 125 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 RGS10O43665 173 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 OR2A4O95047 310 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 DIRAS3O95661 229 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 CRYZL1O95825 349 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 FCGR3AP08637 254 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 APELAP0DMC3 54 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 MYL9P24844 172 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 CLDN12P56749 244 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 ARFRP1Q13795 201 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 TNXAQ16473 311 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 LAIR2Q6ISS4 152 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 FAM89BQ8N5H3 189 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 IL17DQ8TAD2 202 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 DYNLRB2Q8TF09 96 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 SPIN2AQ99865 258 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 SPIN2BQ9BPZ2 258 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 DCUN1D5Q9BTE7 237 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 TINAGL1Q9GZM7 467 aaPredicted RBP5.94□□□□□ -1.46
VPS50-203ENST00000436177 ACOT13Q9NPJ3 140 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 PEF1Q9UBV8 284 aaKnown RBP5.94□□□□□ -1.46
VPS50-203ENST00000436177 RAB22AQ9UL26 194 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 MRPS7Q9Y2R9 242 aaKnown RBP5.94□□□□□ -1.46
VPS50-203ENST00000436177 LSM2Q9Y333 95 aaKnown RBP5.94□□□□□ -1.46
VPS50-203ENST00000436177 V9GY05 133 aa5.94□□□□□ -1.46
VPS50-203ENST00000436177 IGKV1-6A0A0C4DH72 117 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 DPPA5A6NC42 116 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 METTL21EPA6NDL7 271 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 FAM223BA6NKX1 122 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 CASQ2O14958 399 aaPredicted RBP5.93□□□□□ -1.46
VPS50-203ENST00000436177 AIREO43918 545 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 JTBO76095 146 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 TPPPO94811 219 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 OR9G9P0C7N8 305 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 CD36P16671 472 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 LINC00205P59089 165 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 UBE2KP61086 200 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 RPS25P62851 125 aaKnown RBP5.93□□□□□ -1.46
VPS50-203ENST00000436177 RHOGP84095 191 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 DEFA5Q01523 94 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 ATP5G2Q06055 141 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 PJVKQ0ZLH3 352 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 MLLT11Q13015 90 aaPredicted RBP5.93□□□□□ -1.46
VPS50-203ENST00000436177 EXOSC2Q13868 293 aaKnown RBP5.93□□□□□ -1.46
VPS50-203ENST00000436177 KLF5Q13887 457 aaPredicted RBP5.93□□□□□ -1.46
VPS50-203ENST00000436177 ARL6IP1Q15041 203 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 IGSF11Q5DX21 431 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 FAM209BQ5JX69 171 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 HES5Q5TA89 166 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 FAM223AQ8IWN6 122 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 CABLES2Q9BTV7 478 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 SDHAF2Q9NX18 166 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 SLC2A8Q9NY64 477 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 BLOC1S6Q9UL45 172 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 PRELID3BQ9Y3B1 194 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 RYR2Q92736 4967 aa5.93□□□□□ -1.46
VPS50-203ENST00000436177 TRBV6-7A0A0A0MS04 114 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 TMEM272A0A1B0GTI8 110 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 MSGN1A6NI15 193 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 A8MZ25 164 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 IGLV2-23P01705 113 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 HIST1H1DP16402 221 aaKnown RBP5.92□□□□□ -1.46
VPS50-203ENST00000436177 MAP2K4P45985 399 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 TMEM50BP56557 158 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 CD81P60033 236 aa5.92□□□□□ -1.46
VPS50-203ENST00000436177 IRF3Q14653 427 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms