RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 MARVELD3Q96A59 401 aa10.14□□□□□ -0.79
CLDN4-203ENST00000435050 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
CLDN4-203ENST00000435050 UNKLQ9H9P5 680 aaKnown RBP10.14□□□□□ -0.79
CLDN4-203ENST00000435050 WSB1Q9Y6I7 421 aa10.14□□□□□ -0.79
CLDN4-203ENST00000435050 APELAP0DMC3 54 aa10.14□□□□□ -0.79
CLDN4-203ENST00000435050 LYL1P12980 280 aa10.14□□□□□ -0.79
CLDN4-203ENST00000435050 LY6DQ14210 128 aa10.14□□□□□ -0.79
CLDN4-203ENST00000435050 PINX1Q96BK5 328 aaKnown RBP10.14□□□□□ -0.79
CLDN4-203ENST00000435050 QTRT1Q9BXR0 403 aaKnown RBP10.14□□□□□ -0.79
CLDN4-203ENST00000435050 MBNL3Q9NUK0 354 aaKnown RBP10.14□□□□□ -0.79
CLDN4-203ENST00000435050 ZNRD1Q9P1U0 126 aa10.14□□□□□ -0.79
CLDN4-203ENST00000435050 TRBV6-6A0A0A6YYG2 114 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 RBFOX3A6NFN3 312 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 LINC00473A8K010 186 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 IGKV1-39P01597 117 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 IGKV1D-39P04432 117 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 RAB7AP51149 207 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 TAS2R30P59541 319 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 SRSF7Q16629 238 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLDN4-203ENST00000435050 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 LSM10Q969L4 123 aaKnown RBP10.13□□□□□ -0.79
CLDN4-203ENST00000435050 SMIM8Q96KF7 97 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 NIPSNAP3BQ9BS92 247 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 IL19Q9UHD0 177 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 AUP1Q9Y679 476 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 MAP1LC3B2A6NCE7 125 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 SLC31A2O15432 143 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 SPP1P10451 314 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 NQO2P16083 231 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF273Q14593 569 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 CLEC12BQ2HXU8 276 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 OR4S2Q8NH73 311 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 GINS3Q9BRX5 216 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 MAP1LC3BQ9GZQ8 125 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 C17orf100A8MU93 164 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 AWAT1Q58HT5 328 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 FAM209BQ5JX69 171 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 ABHD12Q8N2K0 398 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 ARL6IP6Q8N6S5 226 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 CLRN3Q8NCR9 226 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 ABHD5Q8WTS1 349 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 RBM14Q96PK6 669 aaKnown RBP10.13□□□□□ -0.79
CLDN4-203ENST00000435050 SLC35B3Q9H1N7 401 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 MS4A5Q9H3V2 200 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 SMCO4Q9NRQ5 59 aa10.13□□□□□ -0.79
CLDN4-203ENST00000435050 TRIM77I1YAP6 450 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 K7N7A8 449 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 SLC25A6P12236 298 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 CCL20P78556 96 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 MORN2Q502X0 79 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 IGF2-ASQ6U949 168 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 SSMEM1Q8WWF3 244 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 RAB39BQ96DA2 213 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 JPT1Q9UK76 154 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 ARFGEF3Q5TH69 2177 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-203ENST00000435050 K7ENP7 123 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 CEACAM8P31997 349 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-203ENST00000435050 B2MP61769 119 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 KIAA0141Q14154 515 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF66Q6ZN08 573 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 BARX1Q9HBU1 254 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-203ENST00000435050 A0A0U1RQK1 487 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 C17orf112F2Z3M2 114 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 RPS10P46783 165 aaKnown RBP10.12□□□□□ -0.79
CLDN4-203ENST00000435050 GNB1P62873 340 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 GUSBP1Q15486 140 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 USF2Q15853 346 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-203ENST00000435050 STUMQ69YW2 141 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 COMMD5Q9GZQ3 224 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 GAL3ST2Q9H3Q3 398 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 RPRMQ9NS64 109 aa10.12□□□□□ -0.79
CLDN4-203ENST00000435050 RAB29O14966 203 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 PPIHO43447 177 aaKnown RBP10.11□□□□□ -0.79
CLDN4-203ENST00000435050 CTRB1P17538 263 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 PCP4P48539 62 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 CTRB2Q6GPI1 263 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 BTNL8Q6UX41 500 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 PATZ1Q9HBE1 687 aaKnown RBP10.11□□□□□ -0.79
CLDN4-203ENST00000435050 TMEM140Q9NV12 185 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 HPRT1P00492 218 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 RHEBQ15382 184 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 ADIRFQ15847 76 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 MST1LQ2TV78 715 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF561Q8N587 486 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 TMEM147Q9BVK8 224 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 ELOVL5Q9NYP7 299 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 AKAP13Q12802 2813 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 C1orf196B1AJZ1 125 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 DEFA4P12838 97 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 RAB31Q13636 194 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF880Q6PDB4 577 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 OR4F5Q8NH21 305 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 OR4F4Q96R69 305 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 ADIPOQQ15848 244 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 FAM24BQ8N5W8 94 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms