RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 OR2V2Q96R30 315 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 DIRC2Q96SL1 478 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 S1PR3Q99500 378 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 SFXN3Q9BWM7 321 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 QTRT1Q9BXR0 403 aaKnown RBP8.66□□□□□ -1.02
CD44-210ENST00000434472 NPCDR1Q9BY65 106 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 WDR83OSQ9Y284 106 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 C15orf62A8K5M9 175 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 KBTBD11O94819 623 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 LHBP01229 141 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 IGKV1D-33P01593 117 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 IGKV1-33P01594 117 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 CD55P08174 381 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 CXCL1P09341 107 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 GATA4P43694 442 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 LTC4SQ16873 150 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 TMEM249Q2WGJ8 235 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 WDR25Q64LD2 544 aaPredicted RBP8.65□□□□□ -1.02
CD44-210ENST00000434472 ZNF474Q6S9Z5 364 aaPredicted RBP8.65□□□□□ -1.02
CD44-210ENST00000434472 MOGAT3Q86VF5 341 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 FAM222BQ8WU58 562 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 ADTRPQ96IZ2 230 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 SMIM7Q9BQ49 75 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 DCTN5Q9BTE1 182 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 KCNIP2Q9NS61 270 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 CALYQ9NYX4 217 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 RNF7Q9UBF6 113 aa8.65□□□□□ -1.02
CD44-210ENST00000434472 NCOR1O75376 2440 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 TRBV24-1A0A075B6N3 115 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 TNFSF4P23510 183 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 CDC34P49427 236 aaPredicted RBP8.65□□□□□ -1.03
CD44-210ENST00000434472 THBS3P49746 956 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 EDDM3BP56851 147 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 CD81P60033 236 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 ERVFRD-1P60508 538 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 TFF3Q07654 80 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 RTP5Q14D33 572 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 KRTCAP3Q53RY4 240 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 ZNF343Q6P1L6 599 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 LRP11Q86VZ4 500 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 OR4S2Q8NH73 311 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 ITLN1Q8WWA0 313 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 SDSLQ96GA7 329 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 FAM210BQ96KR6 192 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 SLC25A22Q9H936 323 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.03
CD44-210ENST00000434472 CACNA1GO43497 2377 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 IGHV3OR15-7A0A075B7D8 119 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
CD44-210ENST00000434472 TGIF2-C20orf24A0A0A6YYL0 155 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 TRGV8A0A0C4DH27 118 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 SEC14L6B5MCN3 397 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 SPRY3O43610 288 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 IFNA10P01566 189 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 CGB3P0DN86 165 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 CGB7P0DN87 165 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 CD1BP29016 333 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 CEACAM8P31997 349 aaPredicted RBP8.64□□□□□ -1.03
CD44-210ENST00000434472 CDX1P47902 265 aaPredicted RBP8.64□□□□□ -1.03
CD44-210ENST00000434472 LOXL3P58215 753 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 HOXA4Q00056 320 aaPredicted RBP8.64□□□□□ -1.03
CD44-210ENST00000434472 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 NANPQ8TBE9 248 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 RAB1CQ92928 201 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 NEIL1Q96FI4 390 aaPredicted RBP8.64□□□□□ -1.03
CD44-210ENST00000434472 FAM234AQ9H0X4 552 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 IFI27L2Q9H2X8 130 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
CD44-210ENST00000434472 IL19Q9UHD0 177 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 FAM215AQ9Y5M1 114 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 URGCP-MRPS24S4R325 110 aa8.64□□□□□ -1.03
CD44-210ENST00000434472 TRGV10A0A0A0MS01 117 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 KBTBD11-OT1A0A1B0GTJ5 212 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 PROP1O75360 226 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 VENTXO95231 258 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 S100PP25815 95 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 OPRK1P41145 380 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 VDAC2P45880 294 aaPredicted RBP8.63□□□□□ -1.03
CD44-210ENST00000434472 NDUFA6P56556 154 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
CD44-210ENST00000434472 RELBQ01201 579 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 BSXQ3C1V8 233 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 OR4F5Q8NH21 305 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 FAM57AQ8TBR7 257 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 OR5B12Q96R08 314 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 OR4F4Q96R69 305 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 TXNDC17Q9BRA2 123 aa8.63□□□□□ -1.03
CD44-210ENST00000434472 A0A1W2PPV4 95 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 ZNF729A6NN14 1252 aaPredicted RBP8.62□□□□□ -1.03
CD44-210ENST00000434472 TM4SF5O14894 197 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 CLN5O75503 358 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 S100A2P29034 98 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 TMPRSS3P57727 454 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 TLE1Q04724 770 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 ADIRFQ15847 76 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms