RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ZNF488Q96MN9 340 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM147Q9BVK8 224 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 CLCF1Q9UBD9 225 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 IL36RNQ9UBH0 155 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 CHCHD2Q9Y6H1 151 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 CCL25O15444 150 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 HSBP1O75506 76 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 CCL2P13500 99 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 TRIP6Q15654 476 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 LDLRAD2Q5SZI1 272 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 STUMQ69YW2 141 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 Q6ZRM9 215 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 OR8I2Q8N0Y5 310 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 AP1S3Q96PC3 154 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 RNF2Q99496 336 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 PYGO2Q9BRQ0 406 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 HINT2Q9BX68 163 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 MTCH1Q9NZJ7 389 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 PXMP4Q9Y6I8 212 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 ARL2-SNX15V9GYD0 113 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 PCDH15Q96QU1 1955 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 C5orf49A4QMS7 147 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 NPIPB13A6NJU9 1138 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 NPIPB4C9JG80 1138 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 M0QZ24 198 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1D-33P01593 117 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1-33P01594 117 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 GABRA2P47869 451 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 TFF3Q07654 80 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 DEFB124Q8NES8 71 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 ABHD3Q8WU67 409 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 ST6GALNAC6Q969X2 333 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 IMMP1LQ96LU5 166 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 SF3B5Q9BWJ5 86 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 OR2W1Q9Y3N9 320 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 CACNA1GO43497 2377 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 CFAP54Q96N23 3096 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 RNF212BA8MTL3 300 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 C21orf140B9A014 251 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 SH2D1BO14796 132 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 VENTXO95231 258 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 PDLIM4P50479 330 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 PPP1R32Q7Z5V6 425 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 LINC01551Q86U37 167 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 DTX1Q86Y01 620 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM105Q8N8V8 129 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 NINJ1Q92982 152 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 REPIN1Q9BWE0 567 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 FAM234AQ9H0X4 552 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 SELENOKQ9Y6D0 94 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 GTF3C1Q12789 2109 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 LRP5LA4QPB2 252 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 A6NJY4 79 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 C3orf80F5H4A9 247 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM11P17152 192 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 G6PCP35575 357 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 LTC4SQ16873 150 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 FBLN7Q53RD9 439 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 OR4A47Q6IF82 309 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 APOBEC3DQ96AK3 386 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 C10orf35Q96D05 121 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 PLEKHA3Q9HB20 300 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 OR1A1Q9P1Q5 309 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 WASHC3Q9Y3C0 194 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 TPRP12270 2363 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 DPRXA6NFQ7 191 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 F2Z2F3 143 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 PDE6DO43924 150 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 TDGF1P13385 188 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 CD99P14209 185 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 MAGEA5P43359 124 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 MEOX1P50221 254 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 RPEL1Q2QD12 228 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 GCSAMLQ5JQS6 135 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 TPTE2P1Q5T6R2 138 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 AGMATQ9BSE5 352 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 RNF115Q9Y4L5 304 aa6.28□□□□□ -1.4
SYNPO2-203ENST00000434046 TRGV5A0A0B4J1U4 118 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 VSTM5A8MXK1 200 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 DEGS1O15121 323 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 DNPH1O43598 174 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 KLF7O75840 302 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 ACP1P24666 158 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 RNASEKQ6P5S7 137 aaKnown RBP6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 H2BFWTQ7Z2G1 175 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 VASH2Q86V25 355 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 ODF3L1Q8IXM7 274 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 HEYLQ9NQ87 328 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 ELOVL5Q9NYP7 299 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 FBXL7Q9UJT9 491 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 RPH3ALQ9UNE2 315 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 LOC102723996A0A087X1L8 192 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 ETV2O00321 342 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 NTN3O00634 580 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 ACTL6BO94805 426 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 TNFSF4P23510 183 aa6.27□□□□□ -1.41
SYNPO2-203ENST00000434046 SRIP30626 198 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms