RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 OR2T35Q8NGX2 323 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 LSM10Q969L4 123 aaKnown RBP14.8□□□□□ -0.04
HMGN1-206ENST00000431390 OR10C1Q96KK4 312 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 C2orf50Q96LR7 162 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 TLN2Q9Y4G6 2542 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 MPTX1A8MV57 137 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 BOLA2-SMG1P6H3BVE0 249 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 FCGR3BO75015 233 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 C1QBP02746 253 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 ZFP69Q49AA0 526 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 TGIF2LXQ8IUE1 241 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 ZNF383Q8NA42 475 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 SEC22AQ96IW7 307 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 TBX15Q96SF7 602 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 PCGF1Q9BSM1 259 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 REG4Q9BYZ8 158 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 PLEKHA2Q9HB19 425 aa14.79□□□□□ -0.04
HMGN1-206ENST00000431390 HIVEP2P31629 2446 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 TRAV20A0A0B4J274 112 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 RNASEK-C17orf49H0YIS7 233 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 TXNL1O43396 289 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 HPRT1P00492 218 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 ARG1P05089 322 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 PRB3Q04118 309 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-206ENST00000431390 ZNF816Q0VGE8 651 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-206ENST00000431390 KLRD1Q13241 179 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 IAH1Q2TAA2 248 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-206ENST00000431390 NMSQ5H8A3 153 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 OR4S2Q8NH73 311 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 WDR89Q96FK6 387 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-206ENST00000431390 SPIN2AQ99865 258 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 SPIN2BQ9BPZ2 258 aa14.78□□□□□ -0.04
HMGN1-206ENST00000431390 MRPL20Q9BYC9 149 aaKnown RBP14.78□□□□□ -0.04
HMGN1-206ENST00000431390 RANBP3Q9H6Z4 567 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-206ENST00000431390 RNF223E7ERA6 249 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 LY6LH3BQJ8 138 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 S1PR2O95136 353 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 RRASP10301 218 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 GATA3P23771 443 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 HTR1DP28221 377 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 DHRS7BQ6IAN0 325 aaPredicted RBP14.77□□□□□ -0.04
HMGN1-206ENST00000431390 LINC01356Q8N9X3 169 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 OR5AN1Q8NGI8 311 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 SPATA3Q8NHX4 192 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 NABP2Q9BQ15 211 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 COMMD9Q9P000 198 aa14.77□□□□□ -0.04
HMGN1-206ENST00000431390 LEUTXA8MZ59 168 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 G3V3Q6 166 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 APOA2P02652 100 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 GAPDHP04406 335 aaKnown RBP14.77□□□□□ -0.05
HMGN1-206ENST00000431390 SLC25A6P12236 298 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 CEACAM3P40198 252 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 UBE2E1P51965 193 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 AKR1C2P52895 323 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 FGL1Q08830 312 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 IL15RAQ13261 267 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 DIAPH2-AS1Q14236 149 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 RTL8BQ17RB0 113 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 FAM219AQ8IW50 185 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 ZBTB8BQ8NAP8 495 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-206ENST00000431390 RNASE11Q8TAA1 199 aaKnown RBP14.77□□□□□ -0.05
HMGN1-206ENST00000431390 RPEQ96AT9 228 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 RRNAD1Q96FB5 475 aaKnown RBP14.77□□□□□ -0.05
HMGN1-206ENST00000431390 SLC35D1Q9NTN3 355 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 DPM3Q9P2X0 92 aa14.77□□□□□ -0.05
HMGN1-206ENST00000431390 WNK2Q9Y3S1 2297 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 H0YJW9 148 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 SMLR1H3BR10 107 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 IGKV1-5P01602 117 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 REG1BP48304 166 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 MINOS1Q5TGZ0 78 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 NOXA1Q86UR1 476 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 PPP1R1CQ8WVI7 109 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 MMP24Q9Y5R2 645 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 MINOS1-NBL1R4GNA1 71 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 ZANQ9Y493 2812 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 CR1P17927 2039 aa14.76□□□□□ -0.05
HMGN1-206ENST00000431390 MC5RP33032 325 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 GZMKP49863 264 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 TPTE2P1Q5T6R2 138 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 THOC7Q6I9Y2 204 aaKnown RBP14.75□□□□□ -0.05
HMGN1-206ENST00000431390 PDPNQ86YL7 162 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 LHX4Q969G2 390 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 GPR146Q96CH1 333 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 HYLS1Q96M11 299 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 GSKIPQ9P0R6 139 aa14.75□□□□□ -0.05
HMGN1-206ENST00000431390 TBL2Q9Y4P3 447 aaKnown RBP14.75□□□□□ -0.05
HMGN1-206ENST00000431390 A0A0G2JRQ6 117 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 A0A1B0GU03 582 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 CRYZL1O95825 349 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 P0C879 139 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 NQO2P16083 231 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 EPHA1P21709 976 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 EIF2B2P49770 351 aaKnown RBP14.74□□□□□ -0.05
HMGN1-206ENST00000431390 RAB13P51153 203 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 R3HDM4Q96D70 268 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 HIF1ANQ9NWT6 349 aa14.74□□□□□ -0.05
HMGN1-206ENST00000431390 FBN1P35555 2871 aaKnown RBP14.74□□□□□ -0.05
HMGN1-206ENST00000431390 IGHV1-3A0A0C4DH29 117 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 MARCH11A6NNE9 402 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms