RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	DNAH1	Q9P2D7	4330 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	SRRM4	A7MD48	611 aa	Known RBP	13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738		H3BUA1	57 aa		13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738	PJVK	Q0ZLH3	352 aa		13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738	TPRA1	Q86W33	373 aa		13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738	HARBI1	Q96MB7	349 aa		13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738	GINS4	Q9BRT9	223 aa		13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738	ATG5	Q9H1Y0	275 aa		13.66	□□□□□ -0.22
MRPL28-203	ENST00000429738	IGHV3-11	P01762	117 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	RRAS	P10301	218 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	DUT	P33316	252 aa	Known RBP	13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	TALDO1	P37837	337 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	TPPP2	P59282	170 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	MRGPRG-AS1	Q2M3A8	158 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	CDNF	Q49AH0	187 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	HACD4	Q5VWC8	232 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	ACSM6	Q6P461	480 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	BVES	Q8NE79	360 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	GRPEL2	Q8TAA5	225 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	MS4A10	Q96PG2	267 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738		Q9H521	79 aa		13.65	□□□□□ -0.22
MRPL28-203	ENST00000429738	LINC00473	A8K010	186 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	BRI3	O95415	125 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	HSPB1	P04792	205 aa	Known RBP	13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	CD40LG	P29965	261 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	RTL8B	Q17RB0	113 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	SFXN4	Q6P4A7	337 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	POC5	Q8NA72	575 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	ADTRP	Q96IZ2	230 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	TMEM68	Q96MH6	324 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	DCSTAMP	Q9H295	470 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	SSR3	Q9UNL2	185 aa		13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	RBM7	Q9Y580	266 aa	Known RBP	13.64	□□□□□ -0.23
MRPL28-203	ENST00000429738	SHOX	O15266	292 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	TRGV3	P03979	118 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	CBX3	Q13185	183 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	ZNF773	Q6PK81	442 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	OR51E2	Q9H255	320 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	DAPK2	Q9UIK4	370 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	SMAD5-AS1	Q9Y6J3	95 aa		13.63	□□□□□ -0.23
MRPL28-203	ENST00000429738	SAP30	O75446	220 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	SCGN	O76038	276 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	CNIH1	O95406	144 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	CTXN2	P0C2S0	81 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	PITPNA	Q00169	270 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	TEX45	Q8NA69	505 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	OR5T1	Q8NG75	326 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	LGALS14	Q8TCE9	139 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	RCHY1	Q96PM5	261 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	RRP15	Q9Y3B9	282 aa	Known RBP	13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	OR2W1	Q9Y3N9	320 aa		13.62	□□□□□ -0.23
MRPL28-203	ENST00000429738	TMEM235	A6NFC5	223 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	IGLV2-14	P01704	120 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	HLA-DQB1	P01920	261 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	LYL1	P12980	280 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	SDC2	P34741	201 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	SCAND1	P57086	179 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	UBE2K	P61086	200 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	CNIH2	Q6PI25	160 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	SBSPON	Q8IVN8	264 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	ZNF645	Q8N7E2	425 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	OSR1	Q8TAX0	266 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	NUDCD2	Q8WVJ2	157 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	LYST	Q99698	3801 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738	ST6GALNAC5	Q9BVH7	336 aa		13.61	□□□□□ -0.23
MRPL28-203	ENST00000429738		A0A0G2JLM5	398 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	LCE6A	A0A183	80 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	SSX5	O60225	188 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	CRYZL1	O95825	349 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	NFYA	P23511	347 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	VMA21	Q3ZAQ7	101 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	RNF167	Q9H6Y7	350 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	RANGRF	Q9HD47	186 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	ZNF355P	Q9NSJ1	428 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	RHBDL2	Q9NX52	303 aa		13.6	□□□□□ -0.23
MRPL28-203	ENST00000429738	LY86	O95711	162 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	CLEC2L	P0C7M8	214 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	SPN	P16150	400 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	GNG2	P59768	71 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	PRSS8	Q16651	343 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	OVCH2	Q7RTZ1	564 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	OR6Q1	Q8NGQ2	317 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	SLC25A38	Q96DW6	304 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	GAR1	Q9NY12	217 aa	Known RBP	13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	ANXA10	Q9UJ72	324 aa		13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	RBMX2	Q9Y388	322 aa	Known RBP	13.59	□□□□□ -0.23
MRPL28-203	ENST00000429738	IGKV1D-13	A0A0B4J2D9	117 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	C13orf42	A0A1B0GVH6	325 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738		J3QRK9	145 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	TUSC2	O75896	110 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	SLC22A5	O76082	557 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	IGKV1-13	P0DP09	117 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	GP9	P14770	177 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	ZP3	P21754	424 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	AADAC	P22760	399 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	DYRK1A	Q13627	763 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	IDO2	Q6ZQW0	420 aa		13.58	□□□□□ -0.24
MRPL28-203	ENST00000429738	OR5H6	Q8NGV6	325 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms