RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 MLNRO43193 412 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 RPL23AP62750 156 aaKnown RBP7.96□□□□□ -1.14
NEDD1-203ENST00000429527 CMTM1Q8IZ96 169 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 CPEB3Q8NE35 698 aaKnown RBP7.96□□□□□ -1.14
NEDD1-203ENST00000429527 FGFBP3Q8TAT2 258 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 NRGNQ92686 78 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 GPR146Q96CH1 333 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 FAM210BQ96KR6 192 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 CRLF2Q9HC73 371 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 HSPB7Q9UBY9 170 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 A0A0G2JRQ6 117 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 VWC2LB2RUY7 222 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 CHST1O43916 411 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 SSSCA1O60232 199 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 KBTBD11O94819 623 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 PLAUP00749 431 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 ESDP10768 282 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 FOXG1P55316 489 aaPredicted RBP7.96□□□□□ -1.14
NEDD1-203ENST00000429527 RAB4BP61018 213 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 HNF4GQ14541 408 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 ZNF497Q6ZNH5 498 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 STX12Q86Y82 276 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 FOXRED2Q8IWF2 684 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 CD300LFQ8TDQ1 290 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 TMEM170AQ8WVE7 144 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 HES4Q9HCC6 221 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 MANBALQ9NQG1 85 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 MTCH1Q9NZJ7 389 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 NAT8Q9UHE5 227 aa7.96□□□□□ -1.14
NEDD1-203ENST00000429527 TGIF2-C20orf24A0A0A6YYL0 155 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 GCGP01275 180 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 TRGC1P0CF51 173 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 TUBG1P23258 451 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 APOBEC3AP31941 199 aaPredicted RBP7.95□□□□□ -1.14
NEDD1-203ENST00000429527 SRP14P37108 136 aaKnown RBP7.95□□□□□ -1.14
NEDD1-203ENST00000429527 LCN2P80188 198 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 ACTL10Q5JWF8 245 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 CLEC9AQ6UXN8 241 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 DYRK2Q92630 601 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 BTF3L4Q96K17 158 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 MAGT1Q9H0U3 335 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 TUBG2Q9NRH3 451 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 PPP1R2P9O14990 202 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 YIF1AO95070 293 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 BCL3P20749 454 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 S100A2P29034 98 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 OR2B8PP59922 312 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 ZNF585BQ52M93 769 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 PLCXD3Q63HM9 321 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 TMEM144Q7Z5S9 345 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 ZDHHC23Q8IYP9 409 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 OR51G1Q8NGK1 321 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 FRZBQ92765 325 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 ANAPC16Q96DE5 110 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 GFOD1Q9NXC2 390 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 FLNBO75369 2602 aaKnown RBP7.95□□□□□ -1.14
NEDD1-203ENST00000429527 ALPK2Q86TB3 2170 aa7.95□□□□□ -1.14
NEDD1-203ENST00000429527 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 TRAV24A0A0B4J272 114 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 IGKV1-5P01602 117 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 SCTP09683 121 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 VAMP2P63027 116 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 MRPS11P82912 194 aaKnown RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 Q8N7P7 452 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 ZNF383Q8NA42 475 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 NANOS1Q8WY41 292 aaKnown RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 POM121L2Q96KW2 1035 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 TXNDC17Q9BRA2 123 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 C20orf24Q9BUV8 137 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 UBTD1Q9HAC8 227 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 RPRMQ9NS64 109 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 UBE2J1Q9Y385 318 aaPredicted RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 PUS1Q9Y606 427 aaKnown RBP eCLIP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 DCHS2Q6V1P9 2916 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 TEX15Q9BXT5 2789 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 SMCO3A2RU48 225 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 NDUFS8O00217 210 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 MBP02144 154 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 LCATP04180 440 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 RPS10P46783 165 aaKnown RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 FAM3BP58499 235 aaPredicted RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 ZNF146Q15072 292 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 SSX7Q7RTT5 188 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 Q8IYB0 196 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 SLAMF9Q96A28 289 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 OR51I2Q9H344 312 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 SPTBN1Q01082 2364 aaKnown RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 IFNA1P01562 189 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 FXYD4P59646 89 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 ARF1P84077 181 aaKnown RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 Q5PR19 223 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 THNSL2Q86YJ6 484 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 CRYBG3Q68DQ2 2970 aa7.94□□□□□ -1.14
NEDD1-203ENST00000429527 ANKRD17O75179 2603 aaKnown RBP7.94□□□□□ -1.14
NEDD1-203ENST00000429527 MAST4O15021 2626 aa7.93□□□□□ -1.14
NEDD1-203ENST00000429527 B9A039 149 aa7.93□□□□□ -1.14
NEDD1-203ENST00000429527 SYNGR2O43760 224 aa7.93□□□□□ -1.14
NEDD1-203ENST00000429527 TAS2R60P59551 318 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms