RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
LDB3-205ENST00000429277 H3BVH4 76 aa10.96□□□□□ -0.65
LDB3-205ENST00000429277 FCGR2BP31994 310 aaPredicted RBP10.96□□□□□ -0.65
LDB3-205ENST00000429277 ATP5J2P56134 94 aa10.96□□□□□ -0.65
LDB3-205ENST00000429277 SPAG17Q6Q759 2223 aa10.96□□□□□ -0.65
LDB3-205ENST00000429277 NUP214P35658 2090 aaPredicted RBP10.96□□□□□ -0.65
LDB3-205ENST00000429277 CXCL2P19875 107 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 GLRXP35754 106 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 MIC13Q5XKP0 118 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 ZNF826PQ6ZT77 177 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 G6PC2Q9NQR9 355 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 DLEC1Q9Y238 1755 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 PCM1Q15154 2024 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 IGHV3-72A0A0B4J1Y9 119 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 TM4SF5O14894 197 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 LEPROTL1O95214 131 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 RNF224P0DH78 156 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 RFLNBQ8N5W9 214 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 SLC25A38Q96DW6 304 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 AMELYQ99218 206 aa10.96□□□□□ -0.66
LDB3-205ENST00000429277 PPP1R17O96001 155 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 DCAF12L2Q5VW00 463 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 GGACTQ9BVM4 153 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 TMEM14DPA8MWL7 114 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 RBFOX2O43251 390 aaKnown RBP eCLIP10.95□□□□□ -0.66
LDB3-205ENST00000429277 CXorf66Q5JRM2 361 aaPredicted RBP10.95□□□□□ -0.66
LDB3-205ENST00000429277 NMBP08949 121 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 APOBEC3AP31941 199 aaPredicted RBP10.95□□□□□ -0.66
LDB3-205ENST00000429277 TFPI2P48307 235 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 TMEM177Q53S58 311 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 C2orf83Q53S99 150 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 SPSB2Q99619 263 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 TRIP11Q15643 1979 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 A0A1W2PR77 199 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 NUDT3O95989 172 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 NUP37Q8NFH4 326 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 OSR1Q8TAX0 266 aaPredicted RBP10.95□□□□□ -0.66
LDB3-205ENST00000429277 NEU4Q8WWR8 484 aaPredicted RBP10.95□□□□□ -0.66
LDB3-205ENST00000429277 RGP1Q92546 391 aaPredicted RBP10.95□□□□□ -0.66
LDB3-205ENST00000429277 A0A1W2PP11 408 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 SSTR5P35346 364 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 NINQ8N4C6 2090 aa10.95□□□□□ -0.66
LDB3-205ENST00000429277 IGKV3-11P04433 115 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 FABP2P12104 132 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 RTN4RL2Q86UN3 420 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 COL24A1Q17RW2 1714 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 GDF9O60383 454 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 LGALS3P17931 250 aaKnown RBP10.94□□□□□ -0.66
LDB3-205ENST00000429277 ZNF660Q6AZW8 331 aaPredicted RBP10.94□□□□□ -0.66
LDB3-205ENST00000429277 OR5P3Q8WZ94 311 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 AURKAIP1Q9NWT8 199 aaPredicted RBP10.94□□□□□ -0.66
LDB3-205ENST00000429277 H7C1H1 209 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 NUTF2P61970 127 aaKnown RBP10.94□□□□□ -0.66
LDB3-205ENST00000429277 PSMG4Q5JS54 123 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 HIST1H2BAQ96A08 127 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 ZNF638Q14966 1978 aaKnown RBP10.94□□□□□ -0.66
LDB3-205ENST00000429277 A0A1W2PQM1 296 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 GPX1P07203 203 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 JOSD1Q15040 202 aaPredicted RBP10.94□□□□□ -0.66
LDB3-205ENST00000429277 RAXQ9Y2V3 346 aa10.94□□□□□ -0.66
LDB3-205ENST00000429277 TMEM250H0YL14 139 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 FOLR2P14207 255 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 FAM90A1Q86YD7 464 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 SRXN1Q9BYN0 137 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 IGKV1D-42A0A075B6H8 117 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 PRR19A6NJB7 356 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 GFRA3O60609 400 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 GCM2O75603 506 aaPredicted RBP10.93□□□□□ -0.66
LDB3-205ENST00000429277 CD300CQ08708 224 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 CDCP2Q5VXM1 449 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 SH3BGRL3Q9H299 93 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 FXYD3Q14802 87 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 CSRP2Q16527 193 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 OR1P1Q8NH06 330 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 GPR82Q96P67 336 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 DUX5Q96PT3 197 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 UQCR10Q9UDW1 63 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 A0A0G2JLM5 398 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 KCNAB3O43448 404 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 VENTXO95231 258 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 AGAP20933 346 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 TMEM187Q14656 261 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 IL17BQ9UHF5 180 aa10.93□□□□□ -0.66
LDB3-205ENST00000429277 ARF6P62330 175 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 LINC01590Q5TEZ4 76 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
LDB3-205ENST00000429277 FOCADQ5VW36 1801 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 ARID1AO14497 2285 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 HLA-DRB1P01911 266 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 MESP2Q0VG99 397 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 PRSS8Q16651 343 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms