RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 COLCA1Q6ZS62 124 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 Q6ZSR3 168 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 TMEM18Q96B42 140 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 MS4A10Q96PG2 267 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 FAM173AQ9BQD7 235 aa10.48□□□□□ -0.73
CDH3-202ENST00000429102 J3QT63 122 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 AQP7O14520 342 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 IL18BPO95998 194 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 CBLN1P23435 193 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 NPPCP23582 126 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 ARR3P36575 388 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 TECTBQ96PL2 329 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 LINC00473A8K010 186 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 B4DEV8 164 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 TIMM8AO60220 97 aaPredicted RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 KRTDAPP60985 99 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 MSMO1Q15800 293 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 ZNF124Q15973 351 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 RIMS4Q9H426 269 aaPredicted RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 PLXNB1O43157 2135 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 IGHV3-48P01763 117 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 CEACAM1P13688 526 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 GCH1P30793 250 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 DUSP3P51452 185 aaPredicted RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 SERF2P84101 59 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 PSG7Q13046 419 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 SLC10A1Q14973 349 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 TBC1D28Q2M2D7 210 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 Q6P435 159 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 NEIL1Q96FI4 390 aaPredicted RBP10.47□□□□□ -0.73
CDH3-202ENST00000429102 NPCDR1Q9BY65 106 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 ZDHHC11Q9H8X9 412 aa10.47□□□□□ -0.73
CDH3-202ENST00000429102 NTF3P20783 257 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 SSTP61278 116 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 RPL39P5Q59GN2 51 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 Q6ZR03 302 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 TBX15Q96SF7 602 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 ARRDC1-AS1Q9H2J1 176 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 LRRC30A6NM36 301 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 M0R1X1 148 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 GATA2P23769 480 aaPredicted RBP10.46□□□□□ -0.73
CDH3-202ENST00000429102 OR5I1Q13606 314 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 SSPNQ14714 243 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 CYP2G1PQ6ZSU1 146 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 VN1R17PQ8TDU5 208 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 MBD3L1Q8WWY6 194 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 C5orf30Q96GV9 206 aa10.46□□□□□ -0.73
CDH3-202ENST00000429102 ZFHX2Q9C0A1 2572 aaPredicted RBP10.46□□□□□ -0.74
CDH3-202ENST00000429102 CTXND1A0A1B0GTU2 59 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 IL3RAP26951 378 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 TDRG1Q3Y452 100 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 DPPA3Q6W0C5 159 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 GTF3AQ92664 365 aaKnown RBP10.46□□□□□ -0.74
CDH3-202ENST00000429102 TRIB1Q96RU8 372 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 PARD6AQ9NPB6 346 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 FKBP11Q9NYL4 201 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 MPC1Q9Y5U8 109 aa10.46□□□□□ -0.74
CDH3-202ENST00000429102 OR5B21A6NL26 309 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 DNPH1O43598 174 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 HRASP01112 189 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 TFPI2P48307 235 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 ZNF90Q03938 601 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 TMEM147Q9BVK8 224 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 AKAP6Q13023 2319 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 SPTBN1Q01082 2364 aaKnown RBP10.45□□□□□ -0.74
CDH3-202ENST00000429102 TNRC18O15417 2968 aaPredicted RBP10.45□□□□□ -0.74
CDH3-202ENST00000429102 PCNX2A6NKB5 2137 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 KITLGP21583 273 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 RNFT1Q5M7Z0 435 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 DCAF10Q5QP82 559 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 PPIAL4AQ9Y536 164 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 SPTAN1Q13813 2472 aaKnown RBP10.45□□□□□ -0.74
CDH3-202ENST00000429102 TRBV24-1A0A075B6N3 115 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 RRHO14718 337 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 MBP02144 154 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 ARL14EPLP0DKL9 152 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 MAS1LP35410 378 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 TAS2R60P59551 318 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 GNB1P62873 340 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 CATR1Q13166 79 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 JOSD1Q15040 202 aaPredicted RBP10.45□□□□□ -0.74
CDH3-202ENST00000429102 UTF1Q5T230 341 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 SPATA31B1PQ5VZV4 182 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 LHFPL4Q7Z7J7 247 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 OR4A16Q8NH70 328 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 ABI3Q9P2A4 366 aa10.45□□□□□ -0.74
CDH3-202ENST00000429102 YLPM1P49750 1951 aaKnown RBP10.44□□□□□ -0.74
CDH3-202ENST00000429102 MDFIC2A0A1B0GVS7 189 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms