RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 CER1O95813 267 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 COA6Q5JTJ3 125 aaKnown RBP13.16□□□□□ -0.3
GHDC-203ENST00000428494 ZNF709Q8N972 641 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 NEIL1Q96FI4 390 aaPredicted RBP13.16□□□□□ -0.3
GHDC-203ENST00000428494 C9orf172C9J069 976 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 SMPD2O60906 423 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 OR4A8P0C604 315 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 RAC2P15153 192 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 ATP5G3P48201 142 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 EIF4EBP1Q13541 118 aaPredicted RBP13.16□□□□□ -0.3
GHDC-203ENST00000428494 COTL1Q14019 142 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
GHDC-203ENST00000428494 ACTL10Q5JWF8 245 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 FBXW9Q5XUX1 488 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 SLC25A40Q8TBP6 338 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 OR6C3Q9NZP0 311 aa13.16□□□□□ -0.3
GHDC-203ENST00000428494 SMG1Q96Q15 3661 aaKnown RBP13.16□□□□□ -0.3
GHDC-203ENST00000428494 SSTR5P35346 364 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 PSG7Q13046 419 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 ATP6V1FQ16864 119 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 TBC1D28Q2M2D7 210 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 CST9LP1Q5W188 147 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 H2BFWTQ7Z2G1 175 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 Q8IYB0 196 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 ZNF114Q8NC26 417 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 HCFC1P51610 2035 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
GHDC-203ENST00000428494 NDUFB4O95168 129 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 MEOX1P50221 254 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 EDDM3BP56851 147 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 GNB1P62873 340 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 LTC4SQ16873 150 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 Q8N7P7 452 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 ANAPC16Q96DE5 110 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 DCTN5Q9BTE1 182 aa13.15□□□□□ -0.3
GHDC-203ENST00000428494 A0A1W2PNU3 283 aaPredicted RBP13.14□□□□□ -0.31
GHDC-203ENST00000428494 TMEM30CPA0ZSE6 113 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 C1QTNF9P0C862 333 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 MPV17P39210 176 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 GABRA2P47869 451 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 CDC34P49427 236 aaPredicted RBP13.14□□□□□ -0.31
GHDC-203ENST00000428494 PDLIM4P50479 330 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 DCAF10Q5QP82 559 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 MRPL41Q8IXM3 137 aaKnown RBP13.14□□□□□ -0.31
GHDC-203ENST00000428494 COQ2Q96H96 371 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 PATZ1Q9HBE1 687 aaKnown RBP13.14□□□□□ -0.31
GHDC-203ENST00000428494 IL3RAP26951 378 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 LINC01551Q86U37 167 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
GHDC-203ENST00000428494 OBP2BQ9NPH6 170 aa13.14□□□□□ -0.31
GHDC-203ENST00000428494 SOX15O60248 233 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 NUPR1O60356 82 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 LYZL6O75951 148 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 TDGF1P13385 188 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 HNF1AP20823 631 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 TMEM256Q8N2U0 113 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 SDSLQ96GA7 329 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
GHDC-203ENST00000428494 A0A0U1RQK1 487 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 ZNF320A2RRD8 509 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 C15orf62A8K5M9 175 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 CLDN14O95500 239 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
GHDC-203ENST00000428494 G0S2P27469 103 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 RNFT1Q5M7Z0 435 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 NINJ1Q92982 152 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 SPRY4Q9C004 299 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 FZR1Q9UM11 496 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 PSG11Q9UQ72 335 aa13.13□□□□□ -0.31
GHDC-203ENST00000428494 MLNRO43193 412 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 GCGP01275 180 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 IGHV3-13P01766 116 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 IGHV3-7P01780 117 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 CD82P27701 267 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 CATR1Q13166 79 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 C11orf53Q8IXP5 236 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 IL17BQ9UHF5 180 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 LAMA5O15230 3695 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 OR9G9P0C7N8 305 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 CD33P20138 364 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 SLC10A1Q14973 349 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 PRAMEF6Q5VXH4 476 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 TCF23Q7RTU1 214 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 VKORC1L1Q8N0U8 176 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
GHDC-203ENST00000428494 BEND2Q8NDZ0 799 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 OR13A1Q8NGR1 328 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 NANOS1Q8WY41 292 aaKnown RBP13.12□□□□□ -0.31
GHDC-203ENST00000428494 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 R3HDM4Q96D70 268 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
GHDC-203ENST00000428494 ICE1Q9Y2F5 2266 aa13.11□□□□□ -0.31
GHDC-203ENST00000428494 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms