RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TSPO2Q5TGU0 170 aa4.94□□□□□ -1.62
HERC4-206ENST00000427635 ZIC4Q8N9L1 334 aa4.94□□□□□ -1.62
HERC4-206ENST00000427635 OR10AC1Q8NH08 325 aa4.94□□□□□ -1.62
HERC4-206ENST00000427635 TRAF4Q9BUZ4 470 aaPredicted RBP4.94□□□□□ -1.62
HERC4-206ENST00000427635 TMEM106BQ9NUM4 274 aa4.94□□□□□ -1.62
HERC4-206ENST00000427635 AKAP11Q9UKA4 1901 aa4.94□□□□□ -1.62
HERC4-206ENST00000427635 SPTBN2O15020 2390 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 THBDP07204 575 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 CT62P0C5K7 136 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 RND2P52198 227 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 HIST3H3Q16695 136 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 SHISA2Q6UWI4 295 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 SIGLEC7Q9Y286 467 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 KDM3BQ7LBC6 1761 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 KLK8O60259 260 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 KBTBD11O94819 623 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 IGHV4-34P06331 123 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 GNLYP22749 145 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 BSPH1Q075Z2 132 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 C11orf87Q6NUJ2 197 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 LINC01555Q8NAE3 123 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 DYRK2Q92630 601 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 MYEOVQ96EZ4 313 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 LINC00862A6NCI5 91 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 NKX2-6A6NCS4 301 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 CTAG2O75638 210 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 NTN1O95631 604 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 UCP3P55916 312 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 ZIC1Q15915 447 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 DLEU7Q6UYE1 221 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 PPP1R32Q7Z5V6 425 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 ZNF721Q8TF20 911 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 NRN1Q9NPD7 142 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 RPRMQ9NS64 109 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 IL17BQ9UHF5 180 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 TSSC4Q9Y5U2 329 aaPredicted RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 TIMM23O14925 209 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 PLPPR5Q32ZL2 321 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 TMEM144Q7Z5S9 345 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 LSM10Q969L4 123 aaKnown RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 SIRT4Q9Y6E7 314 aaPredicted RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 C9orf170A2RU37 121 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 PGA4P0DJD7 388 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 PGA5P0DJD9 388 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 FABP5Q01469 135 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 TBR1Q16650 682 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 DNASE2BQ8WZ79 361 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 RNF166Q96A37 237 aaPredicted RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 MRPL13Q9BYD1 178 aaKnown RBP4.93□□□□□ -1.62
HERC4-206ENST00000427635 NPVFQ9HCQ7 196 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 CCL28Q9NRJ3 127 aa4.93□□□□□ -1.62
HERC4-206ENST00000427635 IGKV1D-33P01593 117 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 IGKV1-33P01594 117 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 IGHV3-23P01764 117 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 OR10J1P30954 320 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 RNASE4P34096 147 aaKnown RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 PIGYQ3MUY2 71 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 FAM74A3Q4VXF1 159 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 C2orf83Q53S99 150 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 ARPC1AQ92747 370 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 WDR89Q96FK6 387 aaPredicted RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 TEX37Q96LM6 180 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 SIGLEC12Q96PQ1 595 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 NRIP2Q9BQI9 281 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 CDCA4Q9BXL8 241 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 C11orf68Q9H3H3 251 aaKnown RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 DPM3Q9P2X0 92 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 F8WEM9 126 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 CD8AP01732 235 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 PSG2P11465 335 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 PGFP49763 221 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 C9orf40Q8IXQ3 194 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 WNT10AQ9GZT5 417 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 MMP26Q9NRE1 261 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 ST6GALNAC2Q9UJ37 374 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 PRR32B1ATL7 298 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 CLDN20P56880 219 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 GLDNQ6ZMI3 551 aaPredicted RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 RNF133Q8WVZ7 376 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 PGLYRP3Q96LB9 341 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 FBXL7Q9UJT9 491 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 LRP5O75197 1615 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 NPIPB8E9PQR5 432 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 SFTA3P0C7M3 94 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 RPL34P49207 117 aaKnown RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 ATG4DQ86TL0 474 aaPredicted RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 TMEM37Q8WXS4 190 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 A8MWL6 223 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 OR2H2O95918 312 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 PPYP01298 95 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 TYMSP04818 313 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 LINC00869P0C866 280 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 CGB7P0DN87 165 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 COX6A1P12074 109 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 DNLZQ5SXM8 178 aa4.92□□□□□ -1.62
HERC4-206ENST00000427635 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 RNASEH2CQ8TDP1 164 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms