RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 AMBPP02760 352 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 HOXA6P31267 233 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 ZNF146Q15072 292 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 PEAR1Q5VY43 1037 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-202ENST00000426778 LRP11Q86VZ4 500 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 NANOS1Q8WY41 292 aaKnown RBP12.01□□□□□ -0.49
ERCC3-202ENST00000426778 LEAP2Q969E1 77 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-202ENST00000426778 POLEQ07864 2286 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 PKDREJQ9NTG1 2253 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 YLPM1P49750 1951 aaKnown RBP12.01□□□□□ -0.49
ERCC3-202ENST00000426778 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 TMEM30CPA0ZSE6 113 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 GYPAP02724 150 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 GNB2P62879 340 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 MOB1BQ7L9L4 216 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 TRIB1Q96RU8 372 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-202ENST00000426778 WIPI2Q9Y4P8 454 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 PMS2P5A8MQ11 134 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 PPP5D1E7EU14 171 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 KLRC4-KLRK1H3BQV0 150 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 OR9G9P0C7N8 305 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 TGFBR3Q03167 851 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 C11orf53Q8IXP5 236 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 P2RX4Q99571 388 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 C11orf94C9JXX5 98 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 VWA1Q6PCB0 445 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 ZNF709Q8N972 641 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 ZNF114Q8NC26 417 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 OR5B12Q96R08 314 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 TMEM147Q9BVK8 224 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 IGHV3OR15-7A0A075B7D8 119 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
ERCC3-202ENST00000426778 A0A087X0M5 115 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 CTXND1A0A1B0GTU2 59 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 A0A1B0GX30 115 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 MARCH11A6NNE9 402 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 FCGR3BO75015 233 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
ERCC3-202ENST00000426778 MSMO1Q15800 293 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 ZNF766Q5HY98 468 aa12□□□□□ -0.49
ERCC3-202ENST00000426778 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 C1QTNF9P0C862 333 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 FAM78BQ5VT40 261 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 MDS2Q8NDY4 140 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 TMEM242Q9NWH2 141 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 KLF13Q9Y2Y9 288 aaPredicted RBP11.99□□□□□ -0.49
ERCC3-202ENST00000426778 CSMD1Q96PZ7 3565 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 TIMM8AO60220 97 aaPredicted RBP11.99□□□□□ -0.49
ERCC3-202ENST00000426778 NDUFB4O95168 129 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 CD33P20138 364 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 DDTP30046 118 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 RPL39P5Q59GN2 51 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
ERCC3-202ENST00000426778 RIF1Q5UIP0 2472 aaKnown RBP11.99□□□□□ -0.49
ERCC3-202ENST00000426778 RNF212BA8MTL3 300 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 COX5AP20674 150 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 SOX8P57073 446 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 Q8IYB0 196 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 ACTR3CQ9C0K3 210 aaPredicted RBP11.98□□□□□ -0.49
ERCC3-202ENST00000426778 PRO3102Q9H379 93 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 PITPNC1Q9UKF7 332 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 IFNA10P01566 189 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 GZMBP10144 247 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 CD46P15529 392 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
ERCC3-202ENST00000426778 SPRNQ5BIV9 151 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 TMEM183AQ8IXX5 376 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 ABHD12Q8N2K0 398 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 SSMEM1Q8WWF3 244 aa11.98□□□□□ -0.49
ERCC3-202ENST00000426778 PROP1O75360 226 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-202ENST00000426778 FOXF2Q12947 444 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 CATR1Q13166 79 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 PMS2P11Q13670 270 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 FAM201AQ5SY85 155 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 DMRTC2Q8IXT2 367 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-202ENST00000426778 GUCD1Q96NT3 240 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 DDA1Q9BW61 102 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 ABCA1O95477 2261 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 RRHO14718 337 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 P0C879 139 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 MYOD1P15172 320 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 THBS3P49746 956 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 GNB1P62873 340 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 ACP7Q6ZNF0 438 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 R3HDM4Q96D70 268 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 ZPBPQ9BS86 351 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 DUSP13Q9UII6 198 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 OOEPA6NGQ2 149 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 C15orf62A8K5M9 175 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms