RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 FAM90A24PP0C7X0 464 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 ZNF708P17019 499 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 IGHV1-2P23083 117 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 TMEM183BQ1AE95 376 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 TIMM23BQ5SRD1 257 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 ASPHD2Q6ICH7 369 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 Q6ZN92 141 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-207ENST00000426142 C9orf106Q8NAJ2 232 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 MEGF10Q96KG7 1140 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 SGK494Q96LW2 274 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-207ENST00000426142 C5orf66Q9H5L9 145 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 IGHV3OR16-13A0A075B7E8 117 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 IGHV3-74A0A0B4J1X5 117 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 FAM57AQ8TBR7 257 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 CHRNA10Q9GZZ6 450 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 IL19Q9UHD0 177 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 SS18L1O75177 396 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-207ENST00000426142 HKR1P10072 659 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 PPOXP50336 477 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 ATP5G2Q06055 141 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 SLC16A13Q7RTY0 426 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 TMEM45BQ96B21 275 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 QTRT1Q9BXR0 403 aaKnown RBP6.75□□□□□ -1.33
CTNND1-207ENST00000426142 ALX4Q9H161 411 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-207ENST00000426142 TMEM106BQ9NUM4 274 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 LCTP09848 1927 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 PGPA6NDG6 321 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 CDKN1AP38936 164 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 PTGDSP41222 190 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 CLDN18P56856 261 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 ZNF345Q14585 488 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 FXYD3Q14802 87 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 SAXO1Q8IYX7 474 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 FAM216BQ8N7L0 139 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 MAP1LC3CQ9BXW4 147 aa6.75□□□□□ -1.33
CTNND1-207ENST00000426142 APC2O95996 2303 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 CBY3A6NI87 242 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 PTBP3O95758 552 aaKnown RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 HSPB1P04792 205 aaKnown RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 MRPL14Q6P1L8 145 aaKnown RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 SCGB1D4Q6XE38 83 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 IMMP1LQ96LU5 166 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 LINC00470Q9BZP3 86 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 RALGAPA2Q2PPJ7 1873 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 IGHV3-66A0A0C4DH42 116 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 ZNF729A6NN14 1252 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 BCL2P10415 239 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 MFAP4P55083 255 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 RRN3P1Q2M238 152 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 DRAM1Q8N682 238 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 TCTEX1D1Q8N7M0 179 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 WDYHV1Q96HA8 205 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 SH3BGRL3Q9H299 93 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 ZNF430Q9H8G1 570 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 IGHV2OR16-5A0A0B4J2B6 119 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 IGKV3-20P01619 116 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 TNFRSF9Q07011 255 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 ZNF273Q14593 569 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 ELOBQ15370 118 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 ACP7Q6ZNF0 438 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 TRAF4Q9BUZ4 470 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 ISLRO14498 428 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 FAM74A3Q4VXF1 159 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 CD200R1LQ6Q8B3 271 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 OR4C13Q8NGP0 309 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 A0A1W2PS18 150 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 B4DEV8 164 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 AP4M1O00189 453 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 MUC1P15941 1255 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 GLRXP35754 106 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 HSPE1P61604 102 aaKnown RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 LAIR2Q6ISS4 152 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 DPPA3Q6W0C5 159 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 H1FOOQ8IZA3 346 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 OR4C12Q96R67 309 aa6.74□□□□□ -1.33
CTNND1-207ENST00000426142 SSBP3Q9BWW4 388 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-207ENST00000426142 IGHV3-49A0A0A0MS15 119 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 CORTO00230 105 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 TBX6O95947 436 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-207ENST00000426142 MOSP00540 346 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 HOXA6P31267 233 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 TAF15Q92804 592 aaKnown RBP eCLIP6.73□□□□□ -1.333e-8■■■□□ 14.9
CTNND1-207ENST00000426142 DUX5Q96PT3 197 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 TMEM56-RWDD3S4R434 201 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 TFF1P04155 84 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 PSMB2P49721 201 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 MFAP2P55001 183 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 MYOZ3Q8TDC0 251 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 TMEM186Q96B77 213 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 TP53RKQ96S44 253 aa6.73□□□□□ -1.33
CTNND1-207ENST00000426142 DEPPQ9NTK1 212 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms