RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 R3HDM4Q96D70 268 aa11.8□□□□□ -0.52
CDK3-201ENST00000425876 PATZ1Q9HBE1 687 aaKnown RBP11.8□□□□□ -0.52
CDK3-201ENST00000425876 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
CDK3-201ENST00000425876 SESN1Q9Y6P5 492 aa11.8□□□□□ -0.52
CDK3-201ENST00000425876 J3QR06 171 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 OVOL3O00110 214 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 NQO2P16083 231 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 CAV2P51636 162 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 ZNF137PP52743 207 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
CDK3-201ENST00000425876 TLE4Q04727 773 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 TNFRSF9Q07011 255 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 RPL7L1Q6DKI1 246 aaKnown RBP11.79□□□□□ -0.52
CDK3-201ENST00000425876 EIF5AL1Q6IS14 154 aaKnown RBP11.79□□□□□ -0.52
CDK3-201ENST00000425876 LY6G5BQ8NDX9 201 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 OR9G1Q8NH87 305 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 LRRC20Q8TCA0 184 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 TNFRSF14Q92956 283 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 SMIM8Q96KF7 97 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 ARV1Q9H2C2 271 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 CACFD1Q9UGQ2 172 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 LRRK2Q5S007 2527 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 YLPM1P49750 1951 aaKnown RBP11.79□□□□□ -0.52
CDK3-201ENST00000425876 PTPN13Q12923 2485 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 IGSF23A1L1A6 192 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 FAM24AA6NFZ4 105 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 CDKN1AP38936 164 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 ERVK-16P61578 105 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 DHRS7BQ6IAN0 325 aaPredicted RBP11.79□□□□□ -0.52
CDK3-201ENST00000425876 ZNF383Q8NA42 475 aa11.79□□□□□ -0.52
CDK3-201ENST00000425876 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 PPIAL4CA0A0B4J2A2 164 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 TXNL1O43396 289 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 CT45A6P0DMU7 189 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 CT45A5P0DMU8 189 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 CT45A7P0DMV0 189 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 PPIAL4GP0DN37 164 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 UBE2KP61086 200 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 NHLH2Q02577 135 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 PDZD9Q8IXQ8 264 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 ZNF295-AS1Q8N0V1 137 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 IGFBPL1Q8WX77 278 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 TMEM186Q96B77 213 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 TMEM133Q9H2Q1 129 aa11.78□□□□□ -0.52
CDK3-201ENST00000425876 USP9XQ93008 2570 aaPredicted RBP11.78□□□□□ -0.52
CDK3-201ENST00000425876 DOCK11Q5JSL3 2073 aa11.77□□□□□ -0.52
CDK3-201ENST00000425876 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 A0A1W2PR64 198 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 NXPH3O95157 252 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 LY86O95711 162 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 RRASP10301 218 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 GPR6P46095 362 aaPredicted RBP11.77□□□□□ -0.53
CDK3-201ENST00000425876 RTL8BQ17RB0 113 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 OR10X1Q8NGY0 326 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.53
CDK3-201ENST00000425876 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
CDK3-201ENST00000425876 HRASP01112 189 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 LIPFP07098 398 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 IL3RAP26951 378 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 GNB2P62879 340 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 ZNF266Q14584 549 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
CDK3-201ENST00000425876 STX12Q86Y82 276 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 OR52E5Q8NH55 327 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 CIB3Q96Q77 187 aaPredicted RBP11.76□□□□□ -0.53
CDK3-201ENST00000425876 AIFM2Q9BRQ8 373 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 SMIM3Q9BZL3 60 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 WFDC1Q9HC57 220 aa11.76□□□□□ -0.53
CDK3-201ENST00000425876 LEUTXA8MZ59 168 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 FGF16O43320 207 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 CRYZL1O95825 349 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 SULT1A1P50225 295 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 CLEC9AQ6UXN8 241 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 STPG2Q8N412 459 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 OR5AN1Q8NGI8 311 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 RNF141Q8WVD5 230 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 PCNPQ8WW12 178 aaKnown RBP11.75□□□□□ -0.53
CDK3-201ENST00000425876 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 PCGF1Q9BSM1 259 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CDK3-201ENST00000425876 RBKSQ9H477 322 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 ZNRD1Q9P1U0 126 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
CDK3-201ENST00000425876 DCHS2Q6V1P9 2916 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
CDK3-201ENST00000425876 APOA2P02652 100 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 PRRX1P54821 245 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 FAM74A1Q5RGS3 127 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 ZNF429Q86V71 674 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms