RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 ARV1Q9H2C2 271 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 STRAPQ9Y3F4 350 aaKnown RBP7.78□□□□□ -1.16
HMGB4-201ENST00000425537 MYO18BQ8IUG5 2567 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 ICE1Q9Y2F5 2266 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 FLNCQ14315 2725 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 A0A087X0M5 115 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SAA2-SAA4A0A096LPE2 208 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 A0A1B0GX30 115 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 MEX3AA1L020 520 aaKnown RBP7.77□□□□□ -1.17
HMGB4-201ENST00000425537 RAB19A4D1S5 217 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 ANKRD34BA5PLL1 514 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 A6NNC1 897 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 UMAD1C9J7I0 102 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 TEX46H3BTG2 121 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 TRIM77I1YAP6 450 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 TXNL1O43396 289 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 PPIHO43447 177 aaKnown RBP7.77□□□□□ -1.17
HMGB4-201ENST00000425537 RAMP3O60896 148 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 DANCRP0C864 163 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SAA2P0DJI9 122 aaPredicted RBP7.77□□□□□ -1.17
HMGB4-201ENST00000425537 COL8A2P25067 703 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 GNG10P50151 68 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SULT1A2P50226 295 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF134P52741 427 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SPCS3P61009 180 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 NHLH2Q02577 135 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF273Q14593 569 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 RPL39P5Q59GN2 51 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SLC25A24Q6NUK1 477 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 UQCC3Q6UW78 93 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 OR10X1Q8NGY0 326 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 OR52E5Q8NH55 327 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 C8orf46Q8TAG6 207 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF596Q8TC21 504 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SCGB1C1Q8TD33 95 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 ATP5SQ99766 215 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 SMIM3Q9BZL3 60 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 FKBP11Q9NYL4 201 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 CTSZQ9UBR2 303 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 NUP50Q9UKX7 468 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 AMMECR1Q9Y4X0 333 aaPredicted RBP7.77□□□□□ -1.17
HMGB4-201ENST00000425537 ARFGEF3Q5TH69 2177 aa7.77□□□□□ -1.17
HMGB4-201ENST00000425537 USP9XQ93008 2570 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 DOPEY2Q9Y3R5 2298 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 FASNP49327 2511 aaKnown RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 UTP20O75691 2785 aaKnown RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 IGSF23A1L1A6 192 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 CEBPZOSA8MTT3 80 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF705EA8MWA4 302 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 KIAA1324LA8MWY0 1029 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 KRBOX1C9JBD0 128 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 J3QR06 171 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 LIPFP07098 398 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 IGHV1-8P0DP01 117 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 IGFBP2P18065 325 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 MC5RP33032 325 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 RAB13P51153 203 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 EFNA4P52798 201 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 ERVFRD-1P60508 538 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 POU2AF1Q16633 256 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 AARDQ4LEZ3 155 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 FAM53AQ6NSI3 398 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 IL34Q6ZMJ4 242 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 Q6ZRM9 215 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF833PQ6ZTB9 187 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 STPG2Q8N412 459 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 LILRB2Q8N423 598 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 COMMD1Q8N668 190 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 OR5C1Q8NGR4 320 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 OSR1Q8TAX0 266 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 DTD1Q8TEA8 209 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 DDB2Q92466 427 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 MARC2Q969Z3 335 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 PINX1Q96BK5 328 aaKnown RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 PCGF1Q9BSM1 259 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 PARD6GQ9BYG4 376 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM133Q9H2Q1 129 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 HIPK2Q9H2X6 1198 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 RBKSQ9H477 322 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 UBTD1Q9HAC8 227 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 ENY2Q9NPA8 101 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 SLC35D1Q9NTN3 355 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 PRNDQ9UKY0 176 aa7.76□□□□□ -1.17
HMGB4-201ENST00000425537 KLF2Q9Y5W3 355 aaPredicted RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 HELZ2Q9BYK8 2649 aaKnown RBP7.76□□□□□ -1.17
HMGB4-201ENST00000425537 PPIAL4CA0A0B4J2A2 164 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 I3L521 148 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 SLC31A2O15432 143 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PROP1O75360 226 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 CRYZL1O95825 349 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 F12P00748 615 aaPredicted RBP7.75□□□□□ -1.17
HMGB4-201ENST00000425537 IFNA17P01571 189 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 SOD3P08294 240 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 FGF2P09038 288 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 PPIAL4GP0DN37 164 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 SPP1P10451 314 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 IAPPP10997 89 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 CCL3L1P16619 93 aa7.75□□□□□ -1.17
HMGB4-201ENST00000425537 GPR6P46095 362 aaPredicted RBP7.75□□□□□ -1.17
HMGB4-201ENST00000425537 DYNLT3P51808 116 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms