RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MANBALQ9NQG1 85 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 IL17BQ9UHF5 180 aa6.31□□□□□ -1.4
SMARCC1-202ENST00000425518 SMPD2O60906 423 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 SCGB1D1O95968 90 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 WNT2P09544 360 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 BRWD1-AS2P59051 145 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 PRAMEF6Q5VXH4 476 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 ICE1Q9Y2F5 2266 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 A0A1B0GUS0 222 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 LINC00473A8K010 186 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 C17orf112F2Z3M2 114 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 AGFG2O95081 481 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 SP1P08047 785 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 MPV17P39210 176 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 FABP6P51161 128 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 ACOT6Q3I5F7 207 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 KCNIP4Q6PIL6 250 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 TGIF2LYQ8IUE0 185 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM170AQ8WVE7 144 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 ANAPC16Q96DE5 110 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 PARD6GQ9BYG4 376 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 GP6Q9HCN6 339 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 OR6C3Q9NZP0 311 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 METRNQ9UJH8 293 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 EP300Q09472 2414 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 PMS2P5A8MQ11 134 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 SLC31A2O15432 143 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 C1QTNF9P0C862 333 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 CENPVQ7Z7K6 275 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 CIB3Q96Q77 187 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 TRAPPC1Q9Y5R8 145 aa6.3□□□□□ -1.4
SMARCC1-202ENST00000425518 OOEPA6NGQ2 149 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 A8MWP6 167 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 KLRC4-KLRK1H3BQV0 150 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 FCGR3BO75015 233 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 CLDN14O95500 239 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 GNB1P62873 340 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 SSX2Q16385 188 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM164Q5U3C3 297 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 Q6ZR03 302 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 VKORC1L1Q8N0U8 176 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 ZBTB34Q8NCN2 500 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 MSL2Q9HCI7 577 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 HEYLQ9NQ87 328 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 OR4A8P0C604 315 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 IL3RAP26951 378 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 CD1BP29016 333 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 SSTP61278 116 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 DNLZQ5SXM8 178 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 ATP1A1-AS1Q5TC04 95 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 CNEP1R1Q8N9A8 125 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 OR13A1Q8NGR1 328 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 KLF14Q8TD94 323 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 COQ2Q96H96 371 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 ACY3Q96HD9 319 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 LURAP1Q96LR2 239 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 DSPP15924 2871 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 TRGV5A0A0B4J1U4 118 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 RAB29O14966 203 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 CNN1P51911 297 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 TGFBR3Q03167 851 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 PDLIM3Q53GG5 364 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 RNFT1Q5M7Z0 435 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF114Q8NC26 417 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 SGMS2Q8NHU3 365 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 RNASEH2CQ8TDP1 164 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 R3HDM4Q96D70 268 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 PIEZO1Q92508 2521 aa6.29□□□□□ -1.4
SMARCC1-202ENST00000425518 TNRC6AQ8NDV7 1962 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 GGCTO75223 188 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 GCGP01275 180 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 CD33P20138 364 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 SRP14P37108 136 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 THBS3P49746 956 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 PAX5Q02548 391 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ACTL10Q5JWF8 245 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 PRAMEF5Q5TYX0 476 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 TCF23Q7RTU1 214 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 LINC01551Q86U37 167 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 TGIF2LXQ8IUE1 241 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM256Q8N2U0 113 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 CISD2Q8N5K1 135 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 TAAR6Q96RI8 345 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 SPRR3Q9UBC9 169 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 GNG12Q9UBI6 72 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 KLF13Q9Y2Y9 288 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 CADP27708 2225 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 C15orf62A8K5M9 175 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 TIMM8AO60220 97 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 OR9G9P0C7N8 305 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 P0C879 139 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 IGHV1-2P23083 117 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ACP1P24666 158 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 COL8A2P25067 703 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 CD82P27701 267 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 TAS2R60P59551 318 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ABHD12Q8N2K0 398 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms