RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 H0Y980 276 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 SH2D1BO14796 132 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 OR2H2O95918 312 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 GZMBP10144 247 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 PF4V1P10720 104 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 PRRX1P54821 245 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 SRSF6Q13247 344 aaKnown RBP10.94□□□□□ -0.66
COL12A1-205ENST00000425443 SPINK9Q5DT21 86 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 FAM90A2PQ658T7 463 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF324BQ6AW86 544 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-205ENST00000425443 Q8IYB0 196 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 ZDHHC11Q9H8X9 412 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 RPRMQ9NS64 109 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 IFNA5P01569 189 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 HSPB1P04792 205 aaKnown RBP10.94□□□□□ -0.66
COL12A1-205ENST00000425443 TAS2R30P59541 319 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 SCGB2A2Q13296 93 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 LTC4SQ16873 150 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 OR5D13Q8NGL4 314 aa10.94□□□□□ -0.66
COL12A1-205ENST00000425443 LOC102723971A0A1B0GUV8 181 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 AGFG2O95081 481 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 CEACAM1P13688 526 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 FAM214BQ7L5A3 538 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 TPRX1Q8N7U7 411 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 OR8G5Q8NG78 346 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 OR5R1Q8NH85 324 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 ABHD5Q8WTS1 349 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 TVP23CQ96ET8 276 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 WFIKKN1Q96NZ8 548 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 GP6Q9HCN6 339 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 DUXBA0A1W2PPF3 345 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 RBMXL2O75526 392 aaKnown RBP10.93□□□□□ -0.66
COL12A1-205ENST00000425443 OR4A8P0C604 315 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 HEATR1Q9H583 2144 aaKnown RBP10.93□□□□□ -0.66
COL12A1-205ENST00000425443 B9A039 149 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 BRS3P32247 399 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 MDH2P40926 338 aaKnown RBP10.93□□□□□ -0.66
COL12A1-205ENST00000425443 GLIPR1P48060 266 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF826PQ6ZT77 177 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF610Q8N9Z0 462 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 SCGB1C1Q8TD33 95 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 MSL2Q9HCI7 577 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 KCNIP1Q9NZI2 227 aa10.93□□□□□ -0.66
COL12A1-205ENST00000425443 A0A087WWC5 75 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-205ENST00000425443 KRASP01116 189 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 IGKV1-5P01602 117 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 PPBPP02775 128 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 LINC00205P59089 165 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 BAXQ07812 192 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 H1FOOQ8IZA3 346 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-205ENST00000425443 FRZBQ92765 325 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 GNPNAT1Q96EK6 184 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-205ENST00000425443 NIPSNAP3BQ9BS92 247 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 TPRP12270 2363 aaKnown RBP10.92□□□□□ -0.66
COL12A1-205ENST00000425443 PIGBOS1A0A0B4J2F0 54 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 CD55P08174 381 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 RAB7AP51149 207 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 ZNF816Q0VGE8 651 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-205ENST00000425443 PSG7Q13046 419 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 Q6ZVH6 145 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 MOB1BQ7L9L4 216 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 PSENENQ9NZ42 101 aa10.92□□□□□ -0.66
COL12A1-205ENST00000425443 IGHV3-13P01766 116 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 IGHV3-7P01780 117 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 FTH1P19P0C7X4 201 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 CHRNB4P30926 498 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 FABP6P51161 128 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 CD81P60033 236 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 Q6P435 159 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 INO80CQ6PI98 192 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-205ENST00000425443 SLC35E3Q7Z769 313 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 WDR86Q86TI4 376 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 NECAP1Q8NC96 275 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 SNX22Q96L94 193 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 TXN2Q99757 166 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 UBE2L5PA0A1B0GUS4 154 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 XKRY2A2RUG3 117 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 WNT9BO14905 357 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 TIMM8AO60220 97 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-205ENST00000425443 DEFA4P12838 97 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 MMP9P14780 707 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 BMP5P22003 454 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 MC5RP33032 325 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 Q6ZT83 130 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 KLF14Q8TD94 323 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-205ENST00000425443 ZFP30Q9Y2G7 519 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 DMXL2Q8TDJ6 3036 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 TRBV6-6A0A0A6YYG2 114 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 IGHV3-43A0A0B4J1X8 118 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 IFNL4K9M1U5 179 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 CLDN1O95832 211 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 IGHV3-43DP0DP04 118 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 KLF3P57682 345 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-205ENST00000425443 TESK1Q15569 626 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 GABRA6Q16445 453 aa10.91□□□□□ -0.66
COL12A1-205ENST00000425443 VWA1Q6PCB0 445 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms