RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 INSIG2Q9Y5U4 225 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 ANK3Q12955 4377 aaKnown RBP12.79□□□□□ -0.36
SHOX2-202ENST00000425436 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
SHOX2-202ENST00000425436 MSGN1A6NI15 193 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 SSTR5P35346 364 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 RAB7AP51149 207 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 VAMP2P63027 116 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 COMMD7Q86VX2 200 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 RNASE11Q8TAA1 199 aaKnown RBP12.78□□□□□ -0.36
SHOX2-202ENST00000425436 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 C19orf12Q9NSK7 152 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 GNG12Q9UBI6 72 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 BORCS7-ASMTA0A0B4J1R7 106 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 PPIAL4CA0A0B4J2A2 164 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 KBTBD11-OT1A0A1B0GTJ5 212 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 WRBO00258 174 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 GPR37O15354 613 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 AVPP01185 164 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 PPIAL4GP0DN37 164 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 CGB3P0DN86 165 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 CGB7P0DN87 165 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 PPP1CCP36873 323 aaKnown RBP12.78□□□□□ -0.36
SHOX2-202ENST00000425436 MEF2CQ06413 473 aaPredicted RBP12.78□□□□□ -0.36
SHOX2-202ENST00000425436 MORN2Q502X0 79 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 BTNL3Q6UXE8 466 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 IL17RELQ6ZVW7 336 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 RFESDQ8TAC1 157 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 LINC00574Q9H8X3 128 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 CALYQ9NYX4 217 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 LPAR3Q9UBY5 353 aa12.78□□□□□ -0.36
SHOX2-202ENST00000425436 RCL1Q9Y2P8 373 aaKnown RBP12.78□□□□□ -0.36
SHOX2-202ENST00000425436 hADV38S2A0JD32 116 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.37
SHOX2-202ENST00000425436 INAFM1C9JVW0 142 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 KCNAB3O43448 404 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 ENSAO43768 121 aaKnown RBP12.77□□□□□ -0.37
SHOX2-202ENST00000425436 PITX3O75364 302 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 ARF6P62330 175 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
SHOX2-202ENST00000425436 EIF4EBP1Q13541 118 aaPredicted RBP12.77□□□□□ -0.37
SHOX2-202ENST00000425436 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 TMEM200BQ69YZ2 307 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 LY6G5BQ8NDX9 201 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 OR10A7Q8NGE5 316 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 GPR146Q96CH1 333 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 RAB40CQ96S21 281 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 COA4Q9NYJ1 87 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 TAS2R3Q9NYW6 316 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 SESN1Q9Y6P5 492 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 MTORP42345 2549 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 HIVEP2P31629 2446 aa12.77□□□□□ -0.37
SHOX2-202ENST00000425436 FAM90A26D6RGX4 464 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 GPR12P47775 334 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 AKR1C2P52895 323 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 PAX8Q06710 450 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 ZNF585BQ52M93 769 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 FAM120AOSQ5T036 256 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 C1orf229Q6ZS94 237 aaPredicted RBP12.76□□□□□ -0.37
SHOX2-202ENST00000425436 OR2C3Q8N628 320 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 UBAC2Q8NBM4 344 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
SHOX2-202ENST00000425436 GPHA2Q96T91 129 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 AGMATQ9BSE5 352 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 PARP12Q9H0J9 701 aaKnown RBP12.76□□□□□ -0.37
SHOX2-202ENST00000425436 ONECUT1Q9UBC0 465 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 RNF150Q9ULK6 438 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
SHOX2-202ENST00000425436 NUDT19A8MXV4 375 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 GATA3P23771 443 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 LPAR6P43657 344 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 ARHGDIBP52566 201 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 LOXL3P58215 753 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 ERVFRD-1P60508 538 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 BAXQ07812 192 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 LURAP1LQ8IV03 231 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 C11orf1Q9H5F2 150 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 LYRM2Q9NU23 88 aaPredicted RBP12.75□□□□□ -0.37
SHOX2-202ENST00000425436 SDHAF2Q9NX18 166 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 PSG11Q9UQ72 335 aa12.75□□□□□ -0.37
SHOX2-202ENST00000425436 NIPBLQ6KC79 2804 aaeCLIP12.75□□□□□ -0.37
SHOX2-202ENST00000425436 TRBV23-1A0A0A0MS06 115 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 LIPFP07098 398 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 KIR2DS2P43631 304 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 DLX1P56177 255 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 TAS2R30P59541 319 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
SHOX2-202ENST00000425436 PRB3Q04118 309 aaPredicted RBP12.74□□□□□ -0.37
SHOX2-202ENST00000425436 ZNF273Q14593 569 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
SHOX2-202ENST00000425436 TCTEX1D2Q8WW35 142 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 PCGF1Q9BSM1 259 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 GFOD1Q9NXC2 390 aa12.74□□□□□ -0.37
SHOX2-202ENST00000425436 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms