RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 CDIPTO14735 213 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 RAB4AP20338 218 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 MAGEA5P43359 124 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-204ENST00000424143 C20orf144Q9BQM9 153 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 MED12LQ86YW9 2145 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 A0A1W2PPV4 95 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-204ENST00000424143 PSPNO60542 156 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 HPRT1P00492 218 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 CRYABP02511 175 aaKnown RBP12.7□□□□□ -0.38
C9orf3-204ENST00000424143 AREGP15514 252 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 KIR2DS2P43631 304 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 RANP62826 216 aaKnown RBP12.7□□□□□ -0.38
C9orf3-204ENST00000424143 CR1LQ2VPA4 569 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 COX19Q49B96 90 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 INO80CQ6PI98 192 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-204ENST00000424143 FAM180AQ6UWF9 173 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 OR52L2PQ8NGH6 319 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 R3HDM4Q96D70 268 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 CXXC4Q9H2H0 198 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 ITGB1BP1O14713 200 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 HMGB3O15347 200 aaKnown RBP12.69□□□□□ -0.38
C9orf3-204ENST00000424143 NDUFB4O95168 129 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 ZNF883P0CG24 379 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 CHRNA7P36544 502 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 VDAC2P45880 294 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-204ENST00000424143 TNFSF10P50591 281 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 PMP22Q01453 160 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-204ENST00000424143 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 C1orf174Q8IYL3 243 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 OR10G8Q8NGN5 311 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 HLA-CQ95604 372 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 COQ2Q96H96 371 aa12.69□□□□□ -0.38
C9orf3-204ENST00000424143 XIRP2A4UGR9 3374 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 TRGV8A0A0C4DH27 118 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 MARCH11A6NNE9 402 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 KLRC4-KLRK1H3BQV0 150 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 YPEL1O60688 119 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 OR4A8P0C604 315 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 KITLGP21583 273 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 TIMP3P35625 211 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 ZXDAP98168 799 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 Q0VG73 95 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 SPATA46Q5T0L3 261 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 MDS2Q8NDY4 140 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 SGMS2Q8NHU3 365 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 ZCCHC14Q8WYQ9 949 aaKnown RBP12.68□□□□□ -0.38
C9orf3-204ENST00000424143 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 MS4A10Q96PG2 267 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 YPEL2Q96QA6 119 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 OR2J1Q9GZK6 312 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 NCOR1P1Q9H4R4 102 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 IL36BQ9NZH7 164 aa12.68□□□□□ -0.38
C9orf3-204ENST00000424143 POLR3KQ9Y2Y1 108 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-204ENST00000424143 FAM166BA8MTA8 275 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 SPINT2O43291 252 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 MT-CO2P00403 227 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 SP1P08047 785 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 TPPP2P59282 170 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 RPL19P84098 196 aaKnown RBP12.67□□□□□ -0.38
C9orf3-204ENST00000424143 MZT1Q08AG7 82 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 PSG7Q13046 419 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 TEX38Q6PEX7 206 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 TEX43Q6ZNM6 134 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 FAM90A1Q86YD7 464 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 SFXN3Q9BWM7 321 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 SNHG12Q9BXW3 62 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
C9orf3-204ENST00000424143 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
C9orf3-204ENST00000424143 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
C9orf3-204ENST00000424143 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 TNFSF13O75888 250 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
C9orf3-204ENST00000424143 OR10J4P0C629 311 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 DUTP33316 252 aaKnown RBP12.66□□□□□ -0.38
C9orf3-204ENST00000424143 ATP5G3P48201 142 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 TLE1Q04724 770 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 FOXF2Q12947 444 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 CST9LP1Q5W188 147 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 ZNF808Q8N4W9 903 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-204ENST00000424143 QTRT1Q9BXR0 403 aaKnown RBP12.66□□□□□ -0.38
C9orf3-204ENST00000424143 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 PTPRBP23467 1997 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 LINC00473A8K010 186 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 EREGO14944 169 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 SCGB1D1O95968 90 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms