RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 MRGPREQ86SM8 312 aa2.94□□□□□ -1.94
SYNE1-212ENST00000423061 OR51E1Q8TCB6 317 aa2.94□□□□□ -1.94
SYNE1-212ENST00000423061 HEYLQ9NQ87 328 aaPredicted RBP2.94□□□□□ -1.94
SYNE1-212ENST00000423061 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.94□□□□□ -1.94
SYNE1-212ENST00000423061 A0A1W2PQU0 124 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PRSS38A1L453 326 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 TDRD6O60522 2096 aaKnown RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PRKNO60260 465 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 A0A1W2PS18 150 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FRMD6-AS1P0C7T7 363 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 CLLU1OSQ5K130 101 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 TMEM70Q9BUB7 260 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 hCG_38984A0A1B0GV85 526 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FXYD3Q14802 87 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ABHD17CQ6PCB6 329 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ADTRPQ96IZ2 230 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 HCSTQ9UBK5 93 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ANXA10Q9UJ72 324 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 SNURFLB1AK76 121 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ZNF562Q6V9R5 426 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 VSIRQ9H7M9 311 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 OR11H12B2RN74 326 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 GPX1P07203 203 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ZXDAP98168 799 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PARM1Q6UWI2 310 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 OR11H1Q8NG94 326 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 OR11H2Q8NH07 326 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FOXQ1Q9C009 403 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 RAB1BQ9H0U4 201 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PSENENQ9NZ42 101 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ACSM6Q6P461 480 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 NRTNQ99748 197 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PNRC2Q9NPJ4 139 aaKnown RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 TNFRSF6BO95407 300 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 RPL23P62829 140 aaKnown RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 VPREB3Q9UKI3 123 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ANKRD30BLA7E2S9 258 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 HHEXQ03014 270 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 CTHRC1Q96CG8 243 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 SPTBN2O15020 2390 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 TMEM202A6NGA9 273 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 MEIG1Q5JSS6 88 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 KLF17Q5JT82 389 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 METRNLQ641Q3 311 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 CA13Q8N1Q1 262 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 GPX7Q96SL4 187 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 S1PR2O95136 353 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 NAPSAO96009 420 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 DEFB125Q8N687 156 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 GNG12Q9UBI6 72 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 MYOFQ9NZM1 2061 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 IGLC7A0M8Q6 106 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 K7ESF4 209 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 C1orf140Q5VVS0 124 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 NEUROG1Q92886 237 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ALKBH4Q9NXW9 302 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 IL11P20809 199 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FAM159AQ6UWV7 190 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ADAMTSL4Q6UY14 1074 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 C6orf201Q7Z4U5 140 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 C9orf135Q5VTT2 229 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 SLC16A11Q8NCK7 471 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 C18orf32Q8TCD1 76 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 C8orf86Q6ZUL3 223 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 BCL2L10Q9HD36 194 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 K7EMI3 77 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FOXF1Q12946 379 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 GPR146Q96CH1 333 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ZNF581Q9P0T4 197 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 HSPB6O14558 160 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FAM90A2PQ658T7 463 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 WFDC3Q8IUB2 231 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 JMJD8Q96S16 334 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 CSDC2Q9Y534 153 aaKnown RBP2.93□□□□□ -1.94
SYNE1-212ENST00000423061 TRBV5-5A0A0J9YX44 114 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 IL9P15248 144 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 CSN1S1P47710 185 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 SPEM2Q0P670 501 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 GREB1Q4ZG55 1949 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 TRAV5A0A0B4J249 113 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 VDAC1P21796 283 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 ZNF721Q8TF20 911 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FAM206AQ9NX38 181 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 SLC35E4Q6ICL7 350 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 PGLYRP4Q96LB8 373 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 FAM110AQ9BQ89 295 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 J3QR06 171 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 MT-ND6P03923 174 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 SLC38A11Q08AI6 406 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 Q7L0L9 218 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 EDA2RQ9HAV5 297 aa2.93□□□□□ -1.94
SYNE1-212ENST00000423061 LINC00173Q6ZV60 143 aa2.92□□□□□ -1.94
SYNE1-212ENST00000423061 R4GMQ9 66 aa2.92□□□□□ -1.94
SYNE1-212ENST00000423061 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
SYNE1-212ENST00000423061 ZNF324O75467 553 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms