RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 PLAUP00749 431 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 PGA5P0DJD9 388 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 CD37P11049 281 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 DNM1P46Q6ZS02 220 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 SCARB1Q8WTV0 552 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 OR51I2Q9H344 312 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 CDS2O95674 445 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 AKR1C3P42330 323 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 PPOXP50336 477 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 ZNF645Q8N7E2 425 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 TVP23CQ96ET8 276 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 SDHCQ99643 169 aaPredicted RBP8.19□□□□□ -1.1
CMSS1-201ENST00000421999 RHOFQ9HBH0 211 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 IGHV3-35A0A0C4DH35 117 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 MFNGO00587 321 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 CLN5O75503 358 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 ALX3O95076 343 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 PTBP3O95758 552 aaKnown RBP8.18□□□□□ -1.1
CMSS1-201ENST00000421999 SELLP14151 372 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 CEACAM8P31997 349 aaPredicted RBP8.18□□□□□ -1.1
CMSS1-201ENST00000421999 TFPI2P48307 235 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 ASPHD2Q6ICH7 369 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 OR2T10Q8NGZ9 312 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 RXFP4Q8TDU9 374 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 RCC2Q9P258 522 aaKnown RBP8.18□□□□□ -1.1
CMSS1-201ENST00000421999 METRNQ9UJH8 293 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 EML6Q6ZMW3 1958 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 TRAV40A0A0B4J280 105 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 HTN1P15515 57 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 OR5I1Q13606 314 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 VKORC1L1Q8N0U8 176 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 FBXL17Q9UF56 701 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 VSIG4Q9Y279 399 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 TRIM77I1YAP6 450 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 PAFAH1B2P68402 229 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 CD300CQ08708 224 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 GUCA2BQ16661 112 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 PRSS54Q6PEW0 395 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 NTNG2Q96CW9 530 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 SLX1AQ9BQ83 275 aa8.18□□□□□ -1.1
CMSS1-201ENST00000421999 IGKV3-15P01624 115 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 USF1P22415 310 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 BTNL8Q6UX41 500 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 FGFRL1Q8N441 504 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 SLC25A28Q96A46 364 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 GHITMQ9H3K2 345 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 IGKV1-12A0A0C4DH73 117 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 KBTBD11-OT1A0A1B0GTJ5 212 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 A0A1B0GU03 582 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 IGKV1D-12P01611 117 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 SNRPCP09234 159 aaKnown RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 CD24P25063 80 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 IZUMO4Q1ZYL8 232 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 NCMAPQ5T1S8 102 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 FAM78BQ5VT40 261 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 DRAM1Q8N682 238 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 SLC24A4Q8NFF2 622 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 ST8SIA2Q92186 375 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 MARC2Q969Z3 335 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 DKK4Q9UBT3 224 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 IGKV1-27A0A075B6S5 117 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 SRSF10O75494 262 aaKnown RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 PGLYRP1O75594 196 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 PF4P02776 101 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 MEF2CQ06413 473 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 FXYD3Q14802 87 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 RSPO1Q2MKA7 263 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 LURAP1Q96LR2 239 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 TMEM231Q9H6L2 316 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 LINC00312Q9Y6C7 94 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 MARCH11A6NNE9 402 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 SNAPINO95295 136 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 SPP1P10451 314 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 COL8A1P27658 744 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 MAPK1IP1LQ8NDC0 245 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 OR4X1Q8NH49 305 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 BSCL2Q96G97 398 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-201ENST00000421999 BPESC1Q9GZL8 116 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 FBXL15Q9H469 300 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 ARFGEF3Q5TH69 2177 aa8.17□□□□□ -1.1
CMSS1-201ENST00000421999 NCOA6Q14686 2063 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 E7EQL1 145 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 OR2A4O95047 310 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 IGKV1D-33P01593 117 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 IGKV1-33P01594 117 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 SLC25A5P05141 298 aaKnown RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 CXCL3P19876 107 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 TMEM30BQ3MIR4 351 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms