RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ADTRPQ96IZ2 230 aa13.3□□□□□ -0.28
MSH6-203ENST00000420813 TINAGL1Q9GZM7 467 aaPredicted RBP13.3□□□□□ -0.28
MSH6-203ENST00000420813 IFITM5A6NNB3 132 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 A8MZ25 164 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 SHOXO15266 292 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 GNB3P16520 340 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 MYL9P24844 172 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
MSH6-203ENST00000420813 SSX1Q16384 188 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 CASC10Q5T4H9 136 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 Q8N1Y9 231 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 BVESQ8NE79 360 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 C5orf30Q96GV9 206 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 GINS4Q9BRT9 223 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 RSRP1Q9BUV0 290 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 BLOC1S6Q9UL45 172 aa13.29□□□□□ -0.28
MSH6-203ENST00000420813 SHISA3A0PJX4 238 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 METTL21EPA6NDL7 271 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 GALP22466 123 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 OR10A3P58181 314 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 ARL6IP1Q15041 203 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 VMA21Q3ZAQ7 101 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 ZNF343Q6P1L6 599 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 HAPLN4Q86UW8 402 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 TEX45Q8NA69 505 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 OR9G4Q8NGQ1 327 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 DDB2Q92466 427 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 USMG5Q96IX5 58 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 NDUFB11Q9NX14 153 aa13.28□□□□□ -0.28
MSH6-203ENST00000420813 RBM7Q9Y580 266 aaKnown RBP13.28□□□□□ -0.28
MSH6-203ENST00000420813 ANKRD34BA5PLL1 514 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 SRRM4A7MD48 611 aaKnown RBP13.27□□□□□ -0.29
MSH6-203ENST00000420813 IGHV4-30-4P0DP06 118 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 RAB3BP20337 219 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 DUTP33316 252 aaKnown RBP13.27□□□□□ -0.29
MSH6-203ENST00000420813 UBE2KP61086 200 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 ARFRP1Q13795 201 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 MRGPRG-AS1Q2M3A8 158 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 SGPP2Q8IWX5 399 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 H1FOOQ8IZA3 346 aaPredicted RBP13.27□□□□□ -0.29
MSH6-203ENST00000420813 MAFIPQ8WZ33 124 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 C19orf73Q9NVV2 129 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 COA4Q9NYJ1 87 aa13.27□□□□□ -0.29
MSH6-203ENST00000420813 PEF1Q9UBV8 284 aaKnown RBP13.27□□□□□ -0.29
MSH6-203ENST00000420813 ZNF230Q9UIE0 474 aaPredicted RBP13.27□□□□□ -0.29
MSH6-203ENST00000420813 A0A075B6Q4 140 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 TRDV1A0A1B0GX56 115 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 H0Y980 276 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 TALDO1P37837 337 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 DYRK1AQ13627 763 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 PRSS8Q16651 343 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 IL34Q6ZMJ4 242 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 ADAD2Q8NCV1 583 aaKnown RBP13.26□□□□□ -0.29
MSH6-203ENST00000420813 OSR1Q8TAX0 266 aaPredicted RBP13.26□□□□□ -0.29
MSH6-203ENST00000420813 CITED4Q96RK1 184 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 PHB2Q99623 299 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 SIGLEC8Q9NYZ4 499 aa13.26□□□□□ -0.29
MSH6-203ENST00000420813 CRYZL1O95825 349 aa13.25□□□□□ -0.29
MSH6-203ENST00000420813 OR9G9P0C7N8 305 aa13.25□□□□□ -0.29
MSH6-203ENST00000420813 DTYMKP23919 212 aa13.25□□□□□ -0.29
MSH6-203ENST00000420813 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
MSH6-203ENST00000420813 TATDN3Q17R31 274 aa13.25□□□□□ -0.29
MSH6-203ENST00000420813 MSGN1A6NI15 193 aa13.24□□□□□ -0.29
MSH6-203ENST00000420813 LINC00473A8K010 186 aa13.24□□□□□ -0.29
MSH6-203ENST00000420813 CREBL2O60519 120 aaPredicted RBP13.24□□□□□ -0.29
MSH6-203ENST00000420813 LYL1P12980 280 aa13.24□□□□□ -0.29
MSH6-203ENST00000420813 TNXAQ16473 311 aa13.24□□□□□ -0.29
MSH6-203ENST00000420813 RPEL1Q2QD12 228 aa13.24□□□□□ -0.29
MSH6-203ENST00000420813 SRSF12Q8WXF0 261 aaKnown RBP13.24□□□□□ -0.29
MSH6-203ENST00000420813 CNBD2Q96M20 576 aa13.24□□□□□ -0.29
MSH6-203ENST00000420813 DYNC2H1Q8NCM8 4307 aaKnown RBP13.24□□□□□ -0.29
MSH6-203ENST00000420813 IGKV1D-8A0A087WSZ0 117 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 A0A0B4J203 849 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 OR2A4O95047 310 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 TRBV12-3P01733 135 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 CTXN2P0C2S0 81 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 DEFA5Q01523 94 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 NR2C2APQ86WQ0 139 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 ZNF645Q8N7E2 425 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 SNAPC3Q92966 411 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 ATG5Q9H1Y0 275 aa13.23□□□□□ -0.29
MSH6-203ENST00000420813 TENM2Q9NT68 2774 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 MPPED1O15442 326 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 MRPS14O60783 128 aaKnown RBP13.22□□□□□ -0.29
MSH6-203ENST00000420813 SLC22A5O76082 557 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 CSN3P07498 182 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 APELAP0DMC3 54 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 GABARAPL2P60520 117 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 CDK10Q15131 360 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 C22orf42Q6IC83 251 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 LCN12Q6JVE5 192 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 IDO2Q6ZQW0 420 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 Q8N402 240 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 ACOT12Q8WYK0 555 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 SPIN2AQ99865 258 aa13.22□□□□□ -0.29
MSH6-203ENST00000420813 SPIN2BQ9BPZ2 258 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms