RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 TMEM177Q53S58 311 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 UBE2UQ5VVX9 321 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 ACSM6Q6P461 480 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 TPRA1Q86W33 373 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 MAFIPQ8WZ33 124 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 TPSG1Q9NRR2 321 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 NOTOA8MTQ0 251 aa16.46■□□□□ 0.23
PTPN4-202ENST00000420482 CREBL2O60519 120 aaPredicted RBP16.46■□□□□ 0.23
PTPN4-202ENST00000420482 FGF9P31371 208 aaPredicted RBP16.46■□□□□ 0.23
PTPN4-202ENST00000420482 BVESQ8NE79 360 aa16.46■□□□□ 0.23
PTPN4-202ENST00000420482 PHB2Q99623 299 aa16.46■□□□□ 0.23
PTPN4-202ENST00000420482 YTHDF1Q9BYJ9 559 aaKnown RBP16.46■□□□□ 0.23
PTPN4-202ENST00000420482 STUB1Q9UNE7 303 aa16.46■□□□□ 0.23
PTPN4-202ENST00000420482 SLC22A5O76082 557 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 IGLV2-23P01705 113 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 AADACP22760 399 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 CDNFQ49AH0 187 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 H1FOOQ8IZA3 346 aaPredicted RBP16.45■□□□□ 0.22
PTPN4-202ENST00000420482 OR5T1Q8NG75 326 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 DCSTAMPQ9H295 470 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 SSR3Q9UNL2 185 aa16.45■□□□□ 0.22
PTPN4-202ENST00000420482 A0A0B4J203 849 aa16.44■□□□□ 0.22
PTPN4-202ENST00000420482 HACD4Q5VWC8 232 aa16.44■□□□□ 0.22
PTPN4-202ENST00000420482 SPARTQ8N0X7 666 aa16.44■□□□□ 0.22
PTPN4-202ENST00000420482 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
PTPN4-202ENST00000420482 OSR1Q8TAX0 266 aaPredicted RBP16.44■□□□□ 0.22
PTPN4-202ENST00000420482 TXNL4BQ9NX01 149 aaKnown RBP16.44■□□□□ 0.22
PTPN4-202ENST00000420482 ACTL6BO94805 426 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 BRI3O95415 125 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 ATP6V1G2O95670 118 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 CRYGBP07316 175 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 GP9P14770 177 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 CD36P16671 472 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 DUTP33316 252 aaKnown RBP16.43■□□□□ 0.22
PTPN4-202ENST00000420482 UBE2KP61086 200 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 ST6GALNAC5Q9BVH7 336 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 MRPS7Q9Y2R9 242 aaKnown RBP16.43■□□□□ 0.22
PTPN4-202ENST00000420482 PRELID3BQ9Y3B1 194 aa16.43■□□□□ 0.22
PTPN4-202ENST00000420482 CRYZL1O95825 349 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 SPNP16150 400 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 GNG2P59768 71 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 PJVKQ0ZLH3 352 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 TATDN3Q17R31 274 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 ANKRD13BQ86YJ7 626 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 ZNF645Q8N7E2 425 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 USMG5Q96IX5 58 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 ASCL2Q99929 193 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 COA4Q9NYJ1 87 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 DAPK2Q9UIK4 370 aa16.42■□□□□ 0.22
PTPN4-202ENST00000420482 SMIM30A4D0T7 59 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 MPPED1O15442 326 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 TNXAQ16473 311 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 NR2C2APQ86WQ0 139 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 DDB2Q92466 427 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 DCUN1D5Q9BTE7 237 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 RSRP1Q9BUV0 290 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 TINAGL1Q9GZM7 467 aaPredicted RBP16.41■□□□□ 0.22
PTPN4-202ENST00000420482 RRP15Q9Y3B9 282 aaKnown RBP16.41■□□□□ 0.22
PTPN4-202ENST00000420482 OR2W1Q9Y3N9 320 aa16.41■□□□□ 0.22
PTPN4-202ENST00000420482 SCAND1P57086 179 aa16.4■□□□□ 0.22
PTPN4-202ENST00000420482 CNIH2Q6PI25 160 aa16.4■□□□□ 0.22
PTPN4-202ENST00000420482 ACOT12Q8WYK0 555 aa16.4■□□□□ 0.22
PTPN4-202ENST00000420482 C5orf30Q96GV9 206 aa16.4■□□□□ 0.22
PTPN4-202ENST00000420482 ANKRD34BA5PLL1 514 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 MSGN1A6NI15 193 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 SRRM4A7MD48 611 aaKnown RBP16.39■□□□□ 0.21
PTPN4-202ENST00000420482 SNRPBP14678 240 aaKnown RBP16.39■□□□□ 0.21
PTPN4-202ENST00000420482 SSBP2P81877 361 aaPredicted RBP16.39■□□□□ 0.21
PTPN4-202ENST00000420482 PRSS8Q16651 343 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 SFXN4Q6P4A7 337 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 KCTD9Q7L273 389 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 SPIN2AQ99865 258 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 SPIN2BQ9BPZ2 258 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 PEF1Q9UBV8 284 aaKnown RBP16.39■□□□□ 0.21
PTPN4-202ENST00000420482 STAB2Q8WWQ8 2551 aa16.39■□□□□ 0.21
PTPN4-202ENST00000420482 IGKV1D-8A0A087WSZ0 117 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 TMEM235A6NFC5 223 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 LINC00473A8K010 186 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 FCGR3BO75015 233 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 HLA-DQB1P01920 261 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 OR9G9P0C7N8 305 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 MMD2Q8IY49 270 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 NUDCD2Q8WVJ2 157 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 SRSF12Q8WXF0 261 aaKnown RBP16.38■□□□□ 0.21
PTPN4-202ENST00000420482 ZMAT4Q9H898 229 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 ANXA10Q9UJ72 324 aa16.38■□□□□ 0.21
PTPN4-202ENST00000420482 ELF5Q9UKW6 265 aaPredicted RBP16.38■□□□□ 0.21
PTPN4-202ENST00000420482 SORL1Q92673 2214 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 J3QRK9 145 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 TUSC2O75896 110 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 NFYAP23511 347 aaPredicted RBP16.37■□□□□ 0.21
PTPN4-202ENST00000420482 CDK10Q15131 360 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 ZNF773Q6PK81 442 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 VSTM2AQ8TAG5 236 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 LGALS14Q8TCE9 139 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 HSD17B10Q99714 261 aaKnown RBP16.37■□□□□ 0.21
PTPN4-202ENST00000420482 RHBDL2Q9NX52 303 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 RBMX2Q9Y388 322 aaKnown RBP16.37■□□□□ 0.21
PTPN4-202ENST00000420482 ETV7Q9Y603 341 aa16.37■□□□□ 0.21
PTPN4-202ENST00000420482 H0Y980 276 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms