RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 AARDQ4LEZ3 155 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 TPTE2P1Q5T6R2 138 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 DCAF12L2Q5VW00 463 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 TMEM268Q5VZI3 342 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 CCDC144NLQ6NUI1 221 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 GSG1LQ6UXU4 331 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 PDPNQ86YL7 162 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 TGIF2LXQ8IUE1 241 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 OSR1Q8TAX0 266 aaPredicted RBP11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 SEC22AQ96IW7 307 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 C2orf50Q96LR7 162 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 GPHA2Q96T91 129 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 SIRT7Q9NRC8 400 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 CACFD1Q9UGQ2 172 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 AUP1Q9Y679 476 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 A0A1B0GU03 582 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 GOSR2O14653 212 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 RAMP3O60896 148 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 ARG1P05089 322 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 IGHV4-31P0DP07 118 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 FGL1Q08830 312 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 RTL8BQ17RB0 113 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 GGNBP1Q5YKI7 109 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 LYZL2Q7Z4W2 148 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 UXS1Q8NBZ7 420 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 SPIN2AQ99865 258 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 SPIN2BQ9BPZ2 258 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 RANGRFQ9HD47 186 aaPredicted RBP11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 ZFP57Q9NU63 452 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 ZNRD1Q9P1U0 126 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 MMP24Q9Y5R2 645 aa11.54□□□□□ -0.56
SHMT1P1-201ENST00000419974 SVEP1Q4LDE5 3571 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 IGHV1-3A0A0C4DH29 117 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 CENPVL3A0A0U1RRI6 287 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 PITX3O75364 302 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 ADAP1O75689 374 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 APOA2P02652 100 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 C1QBP02746 253 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 NQO2P16083 231 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 COX7A1P24310 79 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 CD1BP29016 333 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 LPAR6P43657 344 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 CD83Q01151 205 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 RPEQ96AT9 228 aa11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 FYTTD1Q96QD9 318 aaKnown RBP11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
SHMT1P1-201ENST00000419974 NSD1Q96L73 2696 aaPredicted RBP11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 A0A1W2PPI3 338 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 FCGR3BO75015 233 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 HRASP01112 189 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 IGKV1-5P01602 117 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 HOXB5P09067 269 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 LGALS7P47929 136 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 DRAXINQ8NBI3 349 aaPredicted RBP11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 LHX4Q969G2 390 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 AJUBAQ96IF1 538 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR10C1Q96KK4 312 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 SLC35D1Q9NTN3 355 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 PRR13Q9NZ81 148 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.57
SHMT1P1-201ENST00000419974 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 MARCH11A6NNE9 402 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 FAM90A26D6RGX4 464 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 G3V3Q6 166 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 NPFFO15130 113 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 ZNF16P17020 682 aaPredicted RBP11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 DYNLT3P51808 116 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 LGALS4P56470 323 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 LINC00205P59089 165 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 EBI3Q14213 229 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 IAH1Q2TAA2 248 aaPredicted RBP11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 CYB5R2Q6BCY4 276 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 CLEC9AQ6UXN8 241 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 THNSL2Q86YJ6 484 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 TEX29Q8N6K0 151 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 OR4D5Q8NGN0 318 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 CFHR4Q92496 578 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 SMR3AQ99954 134 aa11.51□□□□□ -0.57
SHMT1P1-201ENST00000419974 ABCA2Q9BZC7 2435 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 NAV3Q8IVL0 2385 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 C5orf51A6NDU8 294 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 MPTX1A8MV57 137 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 S1PR2O95136 353 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 FSHBP01225 129 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 SLC25A4P12235 298 aa11.5□□□□□ -0.57
SHMT1P1-201ENST00000419974 LYL1P12980 280 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms