RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PRSS8Q16651 343 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 ACSF3Q4G176 576 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CENPVQ7Z7K6 275 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CD177Q8N6Q3 437 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 WDR31Q8NA23 367 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 OR10A7Q8NGE5 316 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 PCGF1Q9BSM1 259 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CNOT1A5YKK6 2376 aaKnown RBP12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CTXND1A0A1B0GTU2 59 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 TMEM210A6NLX4 147 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 J3QW42 95 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CLDN14O95500 239 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 OR9G9P0C7N8 305 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 NPPCP23582 126 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 UBE2G2P60604 165 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 UTF1Q5T230 341 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 TMEM178AQ8NBL3 297 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 HIST1H2BLQ99880 126 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 CLCF1Q9UBD9 225 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 TIMM9Q9Y5J7 89 aa12.07□□□□□ -0.48
HDAC9-208ENST00000417496 HEATR1Q9H583 2144 aaKnown RBP12.07□□□□□ -0.48
HDAC9-208ENST00000417496 A0A1W2PPQ1 181 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
HDAC9-208ENST00000417496 CECR9P0C854 216 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 KIR2DL2P43627 348 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-208ENST00000417496 INO80CQ6PI98 192 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-208ENST00000417496 C9orf106Q8NAJ2 232 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 ZBTB34Q8NCN2 500 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 PACRGQ96M98 296 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-208ENST00000417496 FCGR3BO75015 233 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 IGKV3-15P01624 115 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 COX5AP20674 150 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 GALR1P47211 349 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 EDDM3BP56851 147 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 FDCSPQ8NFU4 85 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 CXXC4Q9H2H0 198 aa12.06□□□□□ -0.48
HDAC9-208ENST00000417496 SMCO3A2RU48 225 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 ZNF729A6NN14 1252 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 C15orf62A8K5M9 175 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 H7BYZ3 331 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 HOXC12P31275 282 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 SPRNQ5BIV9 151 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 ACTR3CQ9C0K3 210 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 CTDSP1Q9GZU7 261 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 PRO1933Q9H354 126 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 PATZ1Q9HBE1 687 aaKnown RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 ZMAT5Q9UDW3 170 aaKnown RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 TTC28Q96AY4 2481 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 INTS1Q8N201 2190 aaKnown RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 ELOA3CA0A087WX78 387 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-208ENST00000417496 P2RY6Q15077 328 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 PLA2G2CQ5R387 149 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 UNQ6494/PRO21346Q6UXR6 183 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 Q8N7P7 452 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 S100PBPQ96BU1 408 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 TMEM204Q9BSN7 226 aa12.05□□□□□ -0.48
HDAC9-208ENST00000417496 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 RAB29O14966 203 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 SOX15O60248 233 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
HDAC9-208ENST00000417496 CHRNA7P36544 502 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 RPL39P5Q59GN2 51 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 OR2Z1Q8NG97 314 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 LEAP2Q969E1 77 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 DUSP13Q9UII6 198 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 TRAV3A0A0B4J244 114 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 C11orf94C9JXX5 98 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 C15orf65H3BRN8 121 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 GYPAP02724 150 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 ZNF134P52741 427 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
HDAC9-208ENST00000417496 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 ZNRF1Q8ND25 227 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 Q8TCH9 128 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 TMEM37Q8WXS4 190 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 GFOD1Q9NXC2 390 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 GNG12Q9UBI6 72 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 CEP250Q9BV73 2442 aa12.04□□□□□ -0.48
HDAC9-208ENST00000417496 TMEM250H0YL14 139 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 CD1BP29016 333 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 PRDX2P32119 198 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 ATP5G3P48201 142 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 MSMPQ1L6U9 139 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 CST9LP1Q5W188 147 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 ZNF66Q6ZN08 573 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 MEGF10Q96KG7 1140 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 MRPL37Q9BZE1 423 aaKnown RBP12.03□□□□□ -0.48
HDAC9-208ENST00000417496 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 PPP5D1E7EU14 171 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 RRHO14718 337 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 IFNA10P01566 189 aa12.03□□□□□ -0.48
HDAC9-208ENST00000417496 MBP02144 154 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms