RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SRSF4Q08170 494 aaKnown RBP7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 C17orf58Q2M2W7 97 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 LPCAT3Q6P1A2 487 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 GALMQ96C23 342 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 MDFIQ99750 246 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 PRR13Q9NZ81 148 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 KAAG1Q9UBP8 84 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 DOCK11Q5JSL3 2073 aa7.57□□□□□ -1.2
CHRNA1-206ENST00000416004 LOC105371242A0A075B767 164 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 SLC31A2O15432 143 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 CTSDP07339 412 aaPredicted RBP7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 OMGP23515 440 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 VAMP1P23763 118 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 GNRHRP30968 328 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 PPP1CCP36873 323 aaKnown RBP7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 UCP3P55916 312 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 H2BFSP57053 126 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 LTC4SQ16873 150 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 C2orf68Q2NKX9 166 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 PHLDA2Q53GA4 152 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 ZNF841Q6ZN19 808 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 SSX9Q7RTT3 188 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 SECTM1Q8WVN6 248 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 GPHA2Q96T91 129 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 RSRP1Q9BUV0 290 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 NCOR1P1Q9H4R4 102 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 TUBA4BQ9H853 241 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 CALYQ9NYX4 217 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 OR6C3Q9NZP0 311 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 POLR3KQ9Y2Y1 108 aaPredicted RBP7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 OR2W1Q9Y3N9 320 aa7.56□□□□□ -1.2
CHRNA1-206ENST00000416004 HSPA12AO43301 675 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 NDUFB3O43676 98 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 DIRAS3O95661 229 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 HLA-AP01891 365 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 MT-ND4LP03901 98 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 WNT2P09544 360 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 GZMHP20718 246 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 CEACAM6P40199 344 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 ERVFRD-1P60508 538 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 LRRC10Q5BKY1 277 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 TRAT1Q6PIZ9 186 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 LYG2Q86SG7 212 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 ZFP82Q8N141 532 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 OR10V1Q8NGI7 309 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 MALSU1Q96EH3 234 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 SCGB3A2Q96PL1 93 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 SLC5A7Q9GZV3 580 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 MMP26Q9NRE1 261 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 CCL28Q9NRJ3 127 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 C14orf166Q9Y224 244 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 KIAA2026Q5HYC2 2103 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 KBTBD11-OT1A0A1B0GTJ5 212 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 RNF222A6NCQ9 220 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 F5H0A9 414 aaPredicted RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 HSD17B6O14756 317 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 GPR37O15354 613 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 SPINT2O43291 252 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 ENSAO43768 121 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 MMP23AO75900 390 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 IGLV2-14P01704 120 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 LIPFP07098 398 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 ECI1P42126 302 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 PIGPP57054 158 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 LOXL3P58215 753 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 RPL31P62899 125 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 SLC9A3R2Q15599 337 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 SSX2Q16385 188 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 TMEM128Q5BJH2 165 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 TMEM200BQ69YZ2 307 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 ZNF818PQ6ZRF7 136 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 ZNF546Q86UE3 836 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 STOML3Q8TAV4 291 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 CASTOR1Q8WTX7 329 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 H1FXQ92522 213 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 CORO2AQ92828 525 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 OR2S2Q9NQN1 319 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 SLC2A9Q9NRM0 540 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 TNFSF18Q9UNG2 199 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 INSIG2Q9Y5U4 225 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 WNK2Q9Y3S1 2297 aa7.55□□□□□ -1.2
CHRNA1-206ENST00000416004 TRGV10A0A0A0MS01 117 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 AP4M1O00189 453 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 F2RL2O00254 374 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 GOSR2O14653 212 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 IGHV3-7P01780 117 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 OR8U9P0C7N5 309 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 CCL3L1P16619 93 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 ZFP36P26651 326 aaKnown RBP7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 NPBWR1P48145 328 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 TAS2R31P59538 309 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 HTD2P86397 168 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 ANKRD55Q3KP44 614 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
CHRNA1-206ENST00000416004 PRAMEF5Q5TYX0 476 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms