RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 CD83Q01151 205 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 SSX2Q16385 188 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 IZUMO4Q1ZYL8 232 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 FBLN7Q53RD9 439 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 CYB5R2Q6BCY4 276 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 ZNF695Q8IW36 515 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 LGI3Q8N145 548 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 OR5M8Q8NGP6 311 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 RBPMSQ93062 196 aaKnown RBP7.81□□□□□ -1.16
RIF1-202ENST00000414861 ADTRPQ96IZ2 230 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 PRELID3BQ9Y3B1 194 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 MXRA5Q9NR99 2828 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 J3QLI3 93 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 TIMM23O14925 209 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 B3GALNT1O75752 331 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 CRYZL1O95825 349 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 IGKV1-5P01602 117 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 TRAPPC2P0DI81 140 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 TRAPPC2BP0DI82 140 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 LGALS4P56470 323 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 GGNBP1Q5YKI7 109 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 FAM219AQ8IW50 185 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 ST6GAL2Q96JF0 529 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 FYTTD1Q96QD9 318 aaKnown RBP7.81□□□□□ -1.16
RIF1-202ENST00000414861 RANGRFQ9HD47 186 aaPredicted RBP7.81□□□□□ -1.16
RIF1-202ENST00000414861 SLC35D1Q9NTN3 355 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 TET2Q6N021 2002 aaPredicted RBP7.81□□□□□ -1.16
RIF1-202ENST00000414861 MTORP42345 2549 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 FAM25EA8MYX2 175 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 GAPDHP04406 335 aaKnown RBP7.8□□□□□ -1.16
RIF1-202ENST00000414861 EPHA1P21709 976 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 G6PCP35575 357 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 SRPXP78539 464 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 MINOS1Q5TGZ0 78 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 GPR157Q5UAW9 335 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 MOB3BQ86TA1 216 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 VKORC1L1Q8N0U8 176 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 OR4S2Q8NH73 311 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 OR10C1Q96KK4 312 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 CHIAQ9BZP6 476 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 RAB18Q9NP72 206 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 TBL2Q9Y4P3 447 aaKnown RBP7.8□□□□□ -1.16
RIF1-202ENST00000414861 MINOS1-NBL1R4GNA1 71 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 ANK3Q12955 4377 aaKnown RBP7.8□□□□□ -1.16
RIF1-202ENST00000414861 RBFOX2O43251 390 aaKnown RBP eCLIP7.8□□□□□ -1.168e-7■■■□□ 14.6
RIF1-202ENST00000414861 KRASP01116 189 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 CEACAM3P40198 252 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 MIDNQ504T8 468 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 NMSQ5H8A3 153 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 AKAP14Q86UN6 197 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 TCTEX1D1Q8N7M0 179 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 CFHR4Q92496 578 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 IL22RA2Q969J5 263 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 SEC22AQ96IW7 307 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 RITA1Q96K30 269 aa7.8□□□□□ -1.16
RIF1-202ENST00000414861 ZNF436Q9C0F3 470 aaPredicted RBP7.8□□□□□ -1.16
RIF1-202ENST00000414861 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
RIF1-202ENST00000414861 HIVEP1P15822 2718 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 CYSRT1A8MQ03 144 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 H7C2Y5 167 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 CCNKO75909 580 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 APOA2P02652 100 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 HLA-GP17693 338 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 CD24P25063 80 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 KIR2DS2P43631 304 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 AKR1C2P52895 323 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 RTL8BQ17RB0 113 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 CD300LFQ8TDQ1 290 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 WASHC3Q9Y3C0 194 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 A0A0U1RQK1 487 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 C13orf42A0A1B0GVH6 325 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 C5orf51A6NDU8 294 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 MARCH11A6NNE9 402 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 SRRM4A7MD48 611 aaKnown RBP7.79□□□□□ -1.16
RIF1-202ENST00000414861 SMLR1H3BR10 107 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 TXNL1O43396 289 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 PFDN1O60925 122 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 HPRT1P00492 218 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 FSHBP01225 129 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 P0C879 139 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 HABP2Q14520 560 aaPredicted RBP7.79□□□□□ -1.16
RIF1-202ENST00000414861 Q6ZRM9 215 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 SSX9Q7RTT3 188 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 OR8H3Q8N146 312 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 R3HDM4Q96D70 268 aa7.79□□□□□ -1.16
RIF1-202ENST00000414861 VDAC1P21796 283 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 PDPNQ86YL7 162 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 GPR146Q96CH1 333 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 MALSU1Q96EH3 234 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 SMR3AQ99954 134 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 COMMD9Q9P000 198 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 TMED3Q9Y3Q3 217 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 OR2A4O95047 310 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 VENTXO95231 258 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 CNTFRP26992 372 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 RAB13P51153 203 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 IAH1Q2TAA2 248 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms