RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 SPANXN2Q5MJ10 180 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-206ENST00000414829 Q6ZS46 218 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 NDUFA11Q86Y39 141 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 LYSMD2Q8IV50 215 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 STPG2Q8N412 459 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 TMEM229BQ8NBD8 167 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 BVESQ8NE79 360 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 VSTM2AQ8TAG5 236 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 METTL1Q9UBP6 276 aaKnown RBP11.59□□□□□ -0.55
LIMS1-206ENST00000414829 KLK11Q9UBX7 282 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 SH2D7A6NKC9 451 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-206ENST00000414829 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIMS1-206ENST00000414829 CRYZL1O95825 349 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 AP3S2P59780 193 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 PSG5Q15238 335 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 RNASE12Q5GAN4 147 aaKnown RBP11.58□□□□□ -0.56
LIMS1-206ENST00000414829 SLC38A6Q8IZM9 456 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 OR5AU1Q8NGC0 362 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 WIPF2Q8TF74 440 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-206ENST00000414829 C5orf30Q96GV9 206 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 OR51J1Q9H342 316 aa11.58□□□□□ -0.56
LIMS1-206ENST00000414829 LINC00473A8K010 186 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 GPR31O00270 319 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 FCGR3BO75015 233 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 RAB3DO95716 219 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 HRASP01112 189 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 IGLV2-14P01704 120 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 CD74P04233 296 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 FAUP35544 74 aaKnown RBP11.57□□□□□ -0.56
LIMS1-206ENST00000414829 UCP3P55916 312 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 UBE2KP61086 200 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 DGCR2P98153 550 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 TMEM267Q0VDI3 215 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-206ENST00000414829 PRR31Q5SQ13 230 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 AADACL3Q5VUY0 350 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 STEAP1BQ6NZ63 245 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 ZNF562Q6V9R5 426 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 PPP1R27Q86WC6 154 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 MFSD4AQ8N468 514 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 TEX45Q8NA69 505 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 DEDD2Q8WXF8 326 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
LIMS1-206ENST00000414829 DPPA5A6NC42 116 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 SLC25A17O43808 307 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 ACTL6BO94805 426 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 CD3DP04234 171 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 AKAIN1P0CW23 69 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 CNTFRP26992 372 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 SLC6A1P30531 599 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 EIF4EBP1Q13541 118 aaPredicted RBP11.56□□□□□ -0.56
LIMS1-206ENST00000414829 TEX38Q6PEX7 206 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 ZNF818PQ6ZRF7 136 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 ZNF486Q96H40 463 aaPredicted RBP11.56□□□□□ -0.56
LIMS1-206ENST00000414829 HSPB9Q9BQS6 159 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 FXYD6Q9H0Q3 95 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 PARP11Q9NR21 331 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 COMMD9Q9P000 198 aa11.56□□□□□ -0.56
LIMS1-206ENST00000414829 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
LIMS1-206ENST00000414829 IGHV7-81A0A0B4J1V7 117 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 DISC1C4P0D8 188 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 M0QYG6 137 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 ELANEP08246 267 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 CD40LGP29965 261 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 GNRHRP30968 328 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 ETV6P41212 452 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 CRIP2P52943 208 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-206ENST00000414829 CX3CL1P78423 397 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 FOXE3Q13461 319 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 CXorf66Q5JRM2 361 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-206ENST00000414829 OR4F17Q8NGA8 305 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 ABHD5Q8WTS1 349 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 RITA1Q96K30 269 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 OR4F4Q96R69 305 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 PRRT1Q99946 306 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 SOSTQ9BQB4 213 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 FAM212BQ9NTI7 297 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-206ENST00000414829 ZFP57Q9NU63 452 aa11.55□□□□□ -0.56
LIMS1-206ENST00000414829 TCRBV4S1A1TA0A5B7 111 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 ATP6V0E1O15342 81 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 TNFSF12O43508 249 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 CNIH1O95406 144 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 CA2P00918 260 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 PGAM2P15259 253 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 LINC00205P59089 165 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 TAS2R31P59538 309 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 KRTAP10-3P60369 221 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 ERVK-16P61578 105 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 RPL30P62888 115 aaKnown RBP11.54□□□□□ -0.56
LIMS1-206ENST00000414829 CD83Q01151 205 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 SRSF4Q08170 494 aaKnown RBP11.54□□□□□ -0.56
LIMS1-206ENST00000414829 SURF2Q15527 256 aaPredicted RBP11.54□□□□□ -0.56
LIMS1-206ENST00000414829 PYDC2Q56P42 97 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 KHDC1LQ5JSQ8 128 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 CCDC190Q86UF4 302 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 SPAG16Q8N0X2 631 aa11.54□□□□□ -0.56
LIMS1-206ENST00000414829 OR51H1Q8NH63 302 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms