RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 FAM216AQ8WUB2 273 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 IL22RA2Q969J5 263 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 ABHD14BQ96IU4 210 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 GINS3Q9BRX5 216 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 PIMREGQ9BSJ6 248 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 ZNF665Q9H7R5 613 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 TREM1Q9NP99 234 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 FAM212BQ9NTI7 297 aaPredicted RBP8.21□□□□□ -1.09
DDB1-202ENST00000414411 CTSZQ9UBR2 303 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 ARHGAP32A7KAX9 2087 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 DSCAML1Q8TD84 2053 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 ABCA2Q9BZC7 2435 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 WNK2Q9Y3S1 2297 aa8.21□□□□□ -1.09
DDB1-202ENST00000414411 TRIM77I1YAP6 450 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 UBE2CO00762 179 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 TMPRSS2O15393 492 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 ADAM20O43506 726 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 PGLYRP1O75594 196 aaPredicted RBP8.21□□□□□ -1.1
DDB1-202ENST00000414411 SPP1P10451 314 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 SELLP14151 372 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 SLC25A16P16260 332 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 VDAC1P21796 283 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 EWSR1Q01844 656 aaKnown RBP eCLIP8.21□□□□□ -1.1
DDB1-202ENST00000414411 NHLH2Q02577 135 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 ZNF497Q6ZNH5 498 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 FAM216BQ8N7L0 139 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 SEC11CQ9BY50 192 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 PATZ1Q9HBE1 687 aaKnown RBP8.21□□□□□ -1.1
DDB1-202ENST00000414411 MIOXQ9UGB7 285 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 FAM96BQ9Y3D0 163 aa8.21□□□□□ -1.1
DDB1-202ENST00000414411 ACANP16112 2415 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 TRAV20A0A0B4J274 112 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 IGHV4-61A0A0C4DH41 118 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 SIRPB1O00241 398 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 TNFSF12O43508 249 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 CD5P06127 495 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 PVALBP20472 110 aaPredicted RBP8.2□□□□□ -1.1
DDB1-202ENST00000414411 F2RP25116 425 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 S100GP29377 79 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 POLR2GP62487 172 aaKnown RBP eCLIP8.2□□□□□ -1.1
DDB1-202ENST00000414411 HTD2P86397 168 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 CLDND2Q8NHS1 167 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 PLPPR1Q8TBJ4 325 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 SNX22Q96L94 193 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 FAM234AQ9H0X4 552 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 OR1A1Q9P1Q5 309 aa8.2□□□□□ -1.1
DDB1-202ENST00000414411 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
DDB1-202ENST00000414411 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.2□□□□□ -1.19e-9■■■■□ 22.9
DDB1-202ENST00000414411 IGSF23A1L1A6 192 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 RNASEK-C17orf49H0YIS7 233 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 SSSCA1O60232 199 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 IGHV2-5P01817 119 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 OR8U9P0C7N5 309 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 OR3A1P47881 315 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 PAX5Q02548 391 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 SMUG1Q53HV7 270 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
DDB1-202ENST00000414411 WFDC11Q8NEX6 87 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 OR8U1Q8NH10 309 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 IL1F10Q8WWZ1 152 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 NEIL1Q96FI4 390 aaPredicted RBP8.19□□□□□ -1.1
DDB1-202ENST00000414411 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
DDB1-202ENST00000414411 CSPG4Q6UVK1 2322 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 PIGBOS1A0A0B4J2F0 54 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 FAM24AA6NFZ4 105 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 FAM157AC9JC47 383 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 DVL1O14640 695 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 AGPAT2O15120 278 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 PITX3O75364 302 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 MMP9P14780 707 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 ID3Q02535 119 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 FGFRL1Q8N441 504 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 HSD17B11Q8NBQ5 300 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 OR10V1Q8NGI7 309 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 Q96MF0 132 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 SH3BGRL3Q9H299 93 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 MBNL3Q9NUK0 354 aaKnown RBP8.19□□□□□ -1.1
DDB1-202ENST00000414411 PRELID1Q9Y255 219 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 CR1P17927 2039 aa8.19□□□□□ -1.1
DDB1-202ENST00000414411 ABCA1O95477 2261 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 TLN2Q9Y4G6 2542 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 TRAV39A0A0B4J263 110 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 NKX6-3A6NJ46 265 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 MGST3O14880 152 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 NDUFB3O43676 98 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 SNAPINO95295 136 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 USF1P22415 310 aaPredicted RBP8.18□□□□□ -1.1
DDB1-202ENST00000414411 IL2RGP31785 369 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 RAB5CP51148 216 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 DVL1P1P54792 670 aaPredicted RBP8.18□□□□□ -1.1
DDB1-202ENST00000414411 ZNF266Q14584 549 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 MIDNQ504T8 468 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 WDR25Q64LD2 544 aaPredicted RBP8.18□□□□□ -1.1
DDB1-202ENST00000414411 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 OR51H1Q8NH63 302 aa8.18□□□□□ -1.1
DDB1-202ENST00000414411 COQ2Q96H96 371 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms