RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 INAFM2P0DMQ5 153 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 NTF3P20783 257 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 S100GP29377 79 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ERP29P30040 261 aaKnown RBP2.93□□□□□ -1.94
BRCA1-204ENST00000412061 WNT4P56705 351 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 RHOBP62745 196 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 TNFAIP6P98066 277 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-204ENST00000412061 GNA12Q03113 381 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 CAV1Q03135 178 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF79Q15937 498 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 FAM104BQ5XKR9 115 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 UNQ9165/PRO28630Q6UXU0 137 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 MKXQ8IYA7 352 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 OR11H6Q8NGC7 330 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 OR13D1Q8NGV5 346 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 GRPEL2Q8TAA5 225 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 RAB2BQ8WUD1 216 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 C12orf43Q96C57 262 aaKnown RBP2.93□□□□□ -1.94
BRCA1-204ENST00000412061 L3HYPDHQ96EM0 354 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 B9D2Q9BPU9 175 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 MED29Q9NX70 200 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF586Q9NXT0 402 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 RFNGQ9Y644 331 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ATAD5Q96QE3 1844 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 RTL1A6NKG5 1358 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 NUP155O75694 1391 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ROBO3Q96MS0 1386 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 SCN10AQ9Y5Y9 1956 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-204ENST00000412061 IGHV3OR15-7A0A075B7D8 119 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 IGHV3-21A0A0B4J1V1 117 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 VPS37CA5D8V6 355 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-204ENST00000412061 LST1O00453 97 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 KRTAP1-4P0C5Y4 121 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 CGB3P0DN86 165 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 CGB7P0DN87 165 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 PTHLHP12272 177 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 CPMP14384 443 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF19P17023 458 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF32P17041 273 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 OPRM1P35372 400 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 DEFA3P59666 94 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 APOFQ13790 326 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 SMCO1Q147U7 214 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 GRK1Q15835 563 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 C12orf74Q32Q52 190 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 C9orf64Q5T6V5 341 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 PRSS54Q6PEW0 395 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 Q6ZR03 302 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 SLC22A24Q8N4F4 322 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 MIR7-3HGQ8N6C7 128 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 TMEM35BQ8NCS4 154 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF439Q8NDP4 499 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 OR10J5Q8NHC4 309 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 FRZBQ92765 325 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 GPER1Q99527 375 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 AIF1LQ9BQI0 150 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 COMMD5Q9GZQ3 224 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 C6orf62Q9GZU0 229 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-204ENST00000412061 FAM107BQ9H098 131 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 GABARAPL1Q9H0R8 117 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 GPR84Q9NQS5 396 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 TAAR3PQ9P1P4 343 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 SLC23A2Q9UGH3 650 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 PHLDA3Q9Y5J5 127 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 HECW1Q76N89 1606 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PEG3Q9GZU2 1588 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PTPRTO14522 1441 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 BRWD3Q6RI45 1802 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 hCG_1818297A0A087WSY0 165 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PINLYPA6NC86 204 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 A8MT66 165 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 A8MUN3 132 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 LEUTXA8MZ59 168 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 IGLL5B9A064 214 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PANO1I0J062 215 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PIRO00625 290 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 CCNKO75909 580 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PDYNP01213 254 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 IGHV1-46P01743 117 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 C1QBP02746 253 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 CD7P09564 240 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 ELK1P19419 428 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 PHBP35232 272 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 FGF12P61328 243 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 GNG5P63218 68 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 ENDOGQ14249 297 aaKnown RBP2.92□□□□□ -1.94
BRCA1-204ENST00000412061 CST6Q15828 149 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 AKR1C8PQ5T2L2 129 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF664Q8N3J9 261 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 ZFP62Q8NB50 900 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-204ENST00000412061 LMX1AQ8TE12 382 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 RTN4IP1Q8WWV3 396 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-204ENST00000412061 MAFIPQ8WZ33 124 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 ROPN1LQ96C74 230 aa2.92□□□□□ -1.94
BRCA1-204ENST00000412061 ERMAPQ96PL5 475 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms