RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 KLF5Q13887 457 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-210ENST00000409954 SSX1Q16384 188 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 BVESQ8NE79 360 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 CNBD2Q96M20 576 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 TINAGL1Q9GZM7 467 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-210ENST00000409954 NDUFB11Q9NX14 153 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 ZNF230Q9UIE0 474 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-210ENST00000409954 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
MCF2L-210ENST00000409954 H0Y980 276 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 SLC22A5O76082 557 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 DTYMKP23919 212 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 OR10A3P58181 314 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 VMA21Q3ZAQ7 101 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 OSR1Q8TAX0 266 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-210ENST00000409954 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 DCSTAMPQ9H295 470 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
MCF2L-210ENST00000409954 RAB26Q9ULW5 256 aa11.14□□□□□ -0.63
MCF2L-210ENST00000409954 A0A075B6Q4 140 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 MSGN1A6NI15 193 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 SNRPBP14678 240 aaKnown RBP11.13□□□□□ -0.63
MCF2L-210ENST00000409954 DUTP33316 252 aaKnown RBP11.13□□□□□ -0.63
MCF2L-210ENST00000409954 UBE2KP61086 200 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-210ENST00000409954 ZNF343Q6P1L6 599 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 IZUMO2Q6UXV1 221 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 OVCH2Q7RTZ1 564 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-210ENST00000409954 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
MCF2L-210ENST00000409954 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 A8MZ25 164 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 CREBL2O60519 120 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-210ENST00000409954 SCGNO76038 276 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 FGF9P31371 208 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-210ENST00000409954 PRSS8Q16651 343 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 C22orf42Q6IC83 251 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 TPRA1Q86W33 373 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 Q8N1Y9 231 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 OR9G4Q8NGQ1 327 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 DDB2Q92466 427 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 SNAPC3Q92966 411 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 PHB2Q99623 299 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 PRELID3BQ9Y3B1 194 aa11.12□□□□□ -0.63
MCF2L-210ENST00000409954 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 NOTOA8MTQ0 251 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 ACTL6BO94805 426 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 GABARAPL2P60520 117 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 SGPP2Q8IWX5 399 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 MAFIPQ8WZ33 124 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 YTHDF1Q9BYJ9 559 aaKnown RBP11.11□□□□□ -0.63
MCF2L-210ENST00000409954 COA4Q9NYJ1 87 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
MCF2L-210ENST00000409954 CRYZL1O95825 349 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 HLA-DQB1P01920 261 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 TNXAQ16473 311 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 CNIH2Q6PI25 160 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 SLC25A42Q86VD7 318 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 MMD2Q8IY49 270 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 ZNF645Q8N7E2 425 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 ADAD2Q8NCV1 583 aaKnown RBP11.1□□□□□ -0.63
MCF2L-210ENST00000409954 DCUN1D5Q9BTE7 237 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 C19orf73Q9NVV2 129 aa11.1□□□□□ -0.63
MCF2L-210ENST00000409954 IGKV1D-8A0A087WSZ0 117 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 A0A0B4J203 849 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 LINC00473A8K010 186 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 MPPED1O15442 326 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 AIREO43918 545 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 IGHV4-30-4P0DP06 118 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 SYNJ2BPP57105 145 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 DYRK1AQ13627 763 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 CDK10Q15131 360 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 SRSF12Q8WXF0 261 aaKnown RBP11.09□□□□□ -0.63
MCF2L-210ENST00000409954 ACOT12Q8WYK0 555 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 TXNL4BQ9NX01 149 aaKnown RBP11.09□□□□□ -0.63
MCF2L-210ENST00000409954 PEMTQ9UBM1 199 aa11.09□□□□□ -0.63
MCF2L-210ENST00000409954 SSR3Q9UNL2 185 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms