RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ZNF222Q9UK12 451 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 ANAPC10Q9UM13 185 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 ST3GAL6Q9Y274 331 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RBMX2Q9Y388 322 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 NPTNQ9Y639 398 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CACNG2Q9Y698 323 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 ARHGAP32A7KAX9 2087 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 ABCA2Q9BZC7 2435 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 IGKV1D-17A0A075B6S4 117 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 TRBV6-6A0A0A6YYG2 114 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 IGHV1-69-2A0A0G2JMI3 117 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 A0A0G2JMP0 313 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 A0A0X1KG70 313 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SERPINE3A8MV23 424 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 KLLNB2CW77 178 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 GABARAPH6UMI1 98 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SULT1C2O00338 296 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SLC33A1O00400 549 aaPredicted RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 SSX5O60225 188 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 PDCD6O75340 191 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 ZNF737O75373 536 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 FCN3O75636 299 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 UPK1BO75841 260 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 OR2H2O95918 312 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 HAND1O96004 215 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 CYB5AP00167 134 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 CYB5R3P00387 301 aaPredicted RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 GLAP06280 429 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 CSF3P09919 207 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 PSG2P11465 335 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 PTHLHP12272 177 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 MUC1P15941 1255 aaPredicted RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 PRKACAP17612 351 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 COL8A2P25067 703 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 BLVRBP30043 206 aaPredicted RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 TALDO1P37837 337 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 PITPNBP48739 271 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 MRPS10P82664 201 aaKnown RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 IFITM3Q01628 133 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 PAX5Q02548 391 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 IL18Q14116 193 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 ECSCRQ19T08 205 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SMIM21Q3B7S5 101 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SPIN3Q5JUX0 258 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 TMEM69Q5SWH9 247 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 HACD4Q5VWC8 232 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 OLFML2AQ68BL7 652 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 STUMQ69YW2 141 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 REG3GQ6UW15 175 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 FAM131AQ6UXB0 335 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SIGLEC15Q6ZMC9 328 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 C6orf201Q7Z4U5 140 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 BATF2Q8N1L9 274 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 GAPTQ8N292 157 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 CD177Q8N6Q3 437 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 GVQW1Q8N7I0 195 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 GDPD1Q8N9F7 314 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SUMF2Q8NBJ7 301 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 OR4M2Q8NGB6 313 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 OR11L1Q8NGX0 322 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 ANGPTL6Q8NI99 470 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 GPX8Q8TED1 209 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 C15orf40Q8WUR7 153 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SMIM4Q8WVI0 70 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 RDH5Q92781 318 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 EMG1Q92979 244 aaKnown RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SEH1LQ96EE3 360 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SDSLQ96GA7 329 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 ARHGAP5-AS1Q96IT6 56 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SSX3Q99909 188 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 SULT4A1Q9BR01 284 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 RAB1BQ9H0U4 201 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 ELL3Q9HB65 397 aaPredicted RBP3.23□□□□□ -1.89
CLK1-203ENST00000409769 PALMDQ9NP74 551 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 DIABLOQ9NR28 239 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 TREM2Q9NZC2 230 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 MAB21L2Q9Y586 359 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 WNK2Q9Y3S1 2297 aa3.23□□□□□ -1.89
CLK1-203ENST00000409769 ANKRD17O75179 2603 aaKnown RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 PPIAL4EA0A075B759 164 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 IGHV3OR15-7A0A075B7D8 119 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 C13orf42A0A1B0GVH6 325 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 A0A1B0GW55 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 TMEM235A6NFC5 223 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 RFPL4AA6NLU0 287 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 LRRC30A6NM36 301 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 OR2AT4A6NND4 320 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 PPIAL4DF5H284 164 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 RFPL4AL1F8VTS6 287 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 J3QRK9 145 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 LGALS8O00214 317 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 LANCL1O43813 399 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 OR7C1O76099 320 aaPredicted RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 LY6HO94772 140 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 NAPSAO96009 420 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 TFF1P04155 84 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CD74P04233 296 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 786 ms