RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TRGV5A0A0B4J1U4 118 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 A0A0J9YW62 118 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 NDUFB3O43676 98 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 IGHV2-5P01817 119 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 ADMP35318 185 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 LRRC10Q5BKY1 277 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 CHD5Q8TDI0 1954 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 NCBP2LA6PVI3 153 aaKnown RBP15.12■□□□□ 0.01
SMPD4-202ENST00000409031 LYL1P12980 280 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 PKIBQ9C010 78 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 TRAV9-2A0A087WT02 112 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 EPHA8P29322 1005 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-202ENST00000409031 KIR2DL1P43626 348 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-202ENST00000409031 MESP2Q0VG99 397 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 RPP25Q9BUL9 199 aaKnown RBP15.12■□□□□ 0.01
SMPD4-202ENST00000409031 LDLRAD4O15165 306 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 OR4A8P0C604 315 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 CCL3P10147 92 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 SAMD13Q5VXD3 122 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 FAM166AQ6J272 317 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 H3BVH4 76 aa15.12■□□□□ 0.01
SMPD4-202ENST00000409031 ZNF658BQ4V348 819 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-202ENST00000409031 OR2H2O95918 312 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 TDGF1P3P51864 188 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 ARF6P62330 175 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 OR4D5Q8NGN0 318 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 LOC389332A0A1B0GUA5 103 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 GDF9O60383 454 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 SMIM13P0DJ93 91 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 TUSC5Q8IXB3 177 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 PNKDQ8N490 385 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 DRAM1Q8N682 238 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 OR1L1Q8NH94 360 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 ATG2BQ96BY7 2078 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 ALKBH6Q3KRA9 238 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 DCAF10Q5QP82 559 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 AP5S1Q9NUS5 200 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 KIF26BQ2KJY2 2108 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 HBBP68871 147 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 FAM19A2Q8N3H0 131 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 NUDT11Q96G61 164 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 HARBI1Q96MB7 349 aa15.11■□□□□ 0.01
SMPD4-202ENST00000409031 ATP5G3P48201 142 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 OR51G1Q8NGK1 321 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 SNRNP40Q96DI7 357 aaKnown RBP15.1■□□□□ 0.01
SMPD4-202ENST00000409031 SIT1Q9Y3P8 196 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 HYPMO75409 117 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 ZNF430Q9H8G1 570 aaPredicted RBP15.1■□□□□ 0.01
SMPD4-202ENST00000409031 TDRD15B5MCY1 1934 aaKnown RBP15.1■□□□□ 0.01
SMPD4-202ENST00000409031 PGPA6NDG6 321 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 K7ESF4 209 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 ZNF324O75467 553 aaPredicted RBP15.1■□□□□ 0.01
SMPD4-202ENST00000409031 HSPE1P61604 102 aaKnown RBP15.1■□□□□ 0.01
SMPD4-202ENST00000409031 C10orf128Q5T292 105 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 Q6ZS52 159 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 FGF11Q92914 225 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 PGLYRP4Q96LB8 373 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 HS3ST3B1Q9Y662 390 aa15.1■□□□□ 0.01
SMPD4-202ENST00000409031 TRA2AQ13595 282 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMPD4-202ENST00000409031 EREGO14944 169 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 TMEM177Q53S58 311 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 TCF23Q7RTU1 214 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 ZPBPQ9BS86 351 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 C3orf80F5H4A9 247 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 CCL11P51671 97 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 NXPH1P58417 271 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 SSBP3Q9BWW4 388 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-202ENST00000409031 RELQ04864 619 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-202ENST00000409031 PRNTQ86SH4 94 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 NABP2Q9BQ15 211 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 PRDM14Q9GZV8 571 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 ZNF638Q14966 1978 aaKnown RBP15.09■□□□□ 0.01
SMPD4-202ENST00000409031 C9JQL5 133 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 ORM1P02763 201 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 TSPAN7P41732 249 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 SFTPA2Q8IWL1 248 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 GATAD1Q8WUU5 269 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 THYN1Q9P016 225 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 UFC1Q9Y3C8 167 aa15.09■□□□□ 0.01
SMPD4-202ENST00000409031 RBBP6Q7Z6E9 1792 aaKnown RBP15.08■□□□□ 0.01
SMPD4-202ENST00000409031 IGKV1D-43A0A0B4J1Z2 117 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 SCO2A0A1W2PP80 73 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 IGKV3-11P04433 115 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 PSMG4Q5JS54 123 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 HES3Q5TGS1 186 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 CHODLQ9H9P2 273 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 SPCS1Q9Y6A9 102 aa15.08■□□□□ 0.01
SMPD4-202ENST00000409031 LOC107984156A0A0G2JMH3 177 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 CEACAM18A8MTB9 384 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 PROB1E7EW31 1015 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 C1QTNF9P0C862 333 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 ARL17AQ8IVW1 177 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 STPG3Q8N7X2 389 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 GRAMD2BQ96HH9 432 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 ST6GALNAC6Q969X2 333 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 RTN4RQ9BZR6 473 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 FZR1Q9UM11 496 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 TCF19Q9Y242 345 aa15.08■□□□□ 0
SMPD4-202ENST00000409031 LOXL2Q9Y4K0 774 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms