RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FAM90A24PP0C7X0 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 ID1P41134 155 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 LCN15Q6UWW0 184 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 GPHA2Q96T91 129 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 SSBP4Q9BWG4 385 aaPredicted RBP13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF665Q9H7R5 613 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF816-ZNF321PA0A0X1KG74 233 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 hCG_38984A0A1B0GV85 526 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR6C6A6NF89 314 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 H0Y980 276 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 SCTP09683 121 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 CLDN15P56746 228 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF611Q8N823 705 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 SCRG1O75711 98 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 HLA-HP01893 362 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 C9orf135Q5VTT2 229 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 PSMF1Q92530 271 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 UHRF2Q96PU4 802 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
COL4A3BP-204ENST00000405807 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 PDE6DO43924 150 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 TUSC2O75896 110 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 IFNA1P01562 189 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZNF32P17041 273 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 PLP1P60201 277 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 ARG2P78540 354 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 KRTAP27-1Q3LI81 207 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 ACSF3Q4G176 576 aaPredicted RBP13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 TCTEX1D4Q5JR98 221 aa13.71□□□□□ -0.22
COL4A3BP-204ENST00000405807 KIR2DS1A0A191URI9 304 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 SLC25A6P12236 298 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 KIR2DS4P43632 304 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 KIR2DS1Q14954 304 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 DAZAP2Q15038 168 aaPredicted RBP13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 FFAR4Q5NUL3 377 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR5B3Q8NH48 314 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZC2HC1AQ96GY0 325 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 PSMG3Q9BT73 122 aaPredicted RBP13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 H3BP45 60 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 PGLYRP1O75594 196 aaPredicted RBP13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 NAPSAO96009 420 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 KITLGP21583 273 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 DSCR4P56555 118 aaPredicted RBP13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 ADIRFQ15847 76 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 MUC15Q8N387 334 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 Q8N976 141 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR2T10Q8NGZ9 312 aa13.7□□□□□ -0.22
COL4A3BP-204ENST00000405807 CEBPZOSA8MTT3 80 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 PATE4P0C8F1 98 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 SPAG17Q6Q759 2223 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 GRIFINA4D1Z8 144 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 TNFSF11O14788 317 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 SH2D1BO14796 132 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZIC3O60481 467 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 SERF2P84101 59 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 PSG4Q00888 419 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR4F17Q8NGA8 305 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR4F4Q96R69 305 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 SAMD10Q9BYL1 202 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 FBXL7Q9UJT9 491 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 RNF114Q9Y508 228 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 TRAPPC1Q9Y5R8 145 aa13.69□□□□□ -0.22
COL4A3BP-204ENST00000405807 TRAV8-6A0A0B4J262 113 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 F2RP25116 425 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZNF726P1Q15940 193 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 MRAP2Q96G30 205 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 VSIRQ9H7M9 311 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 A0A0J9YW62 118 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 HRASP01112 189 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 SERPINE2P07093 398 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 LIFP15018 202 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 B4GALT1P15291 398 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 SLC25A45Q8N413 288 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 RARRES3Q9UL19 164 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 SELENOKQ9Y6D0 94 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 GAGE10A6NGK3 116 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR11H12B2RN74 326 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 ARL3P36405 182 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 MDH2P40926 338 aaKnown RBP13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 PCBD1P61457 104 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 MSMO1Q15800 293 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 LTC4SQ16873 150 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZNF788Q6ZQV5 615 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR11H1Q8NG94 326 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR11H2Q8NH07 326 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 OR2H1Q9GZK4 316 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 ATP23Q9Y6H3 246 aa13.68□□□□□ -0.22
COL4A3BP-204ENST00000405807 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 KIAA1324LA8MWY0 1029 aaPredicted RBP13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 TYMSP04818 313 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 GATA3P23771 443 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 MPV17L2Q567V2 206 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 NEGR1Q7Z3B1 354 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 AGMATQ9BSE5 352 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms