RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 LAX1Q8IWV1 398 aa15.07■□□□□ 0
RTN4-207ENST00000402434 RNF152Q8N8N0 203 aa15.07■□□□□ 0
RTN4-207ENST00000402434 ZBTB34Q8NCN2 500 aa15.07■□□□□ 0
RTN4-207ENST00000402434 OR5H2Q8NGV7 314 aa15.07■□□□□ 0
RTN4-207ENST00000402434 HARBI1Q96MB7 349 aa15.07■□□□□ 0
RTN4-207ENST00000402434 RBM38Q9H0Z9 239 aaKnown RBP15.07■□□□□ 0
RTN4-207ENST00000402434 CCL28Q9NRJ3 127 aa15.07■□□□□ 0
RTN4-207ENST00000402434 PRELID3BQ9Y3B1 194 aa15.07■□□□□ 0
RTN4-207ENST00000402434 NOTCH3Q9UM47 2321 aa15.06■□□□□ 0
RTN4-207ENST00000402434 SHOXO15266 292 aa15.06■□□□□ 0
RTN4-207ENST00000402434 VDAC1P21796 283 aa15.06■□□□□ 0
RTN4-207ENST00000402434 HLA-DMAP28067 261 aa15.06■□□□□ 0
RTN4-207ENST00000402434 RCVRNP35243 200 aa15.06■□□□□ 0
RTN4-207ENST00000402434 HRH1P35367 487 aa15.06■□□□□ 0
RTN4-207ENST00000402434 CRIP2P52943 208 aaPredicted RBP15.06■□□□□ 0
RTN4-207ENST00000402434 FOXE3Q13461 319 aa15.06■□□□□ 0
RTN4-207ENST00000402434 PPP1R27Q86WC6 154 aa15.06■□□□□ 0
RTN4-207ENST00000402434 OSR1Q8TAX0 266 aaPredicted RBP15.06■□□□□ 0
RTN4-207ENST00000402434 R3HDM4Q96D70 268 aa15.06■□□□□ 0
RTN4-207ENST00000402434 SLC5A7Q9GZV3 580 aa15.06■□□□□ 0
RTN4-207ENST00000402434 PARP11Q9NR21 331 aa15.06■□□□□ 0
RTN4-207ENST00000402434 ZFP57Q9NU63 452 aa15.06■□□□□ 0
RTN4-207ENST00000402434 TNCP24821 2201 aa15.05■□□□□ 0
RTN4-207ENST00000402434 A0A1W2PRX2 142 aa15.05■□□□□ -0
RTN4-207ENST00000402434 CRYZL1O95825 349 aa15.05■□□□□ -0
RTN4-207ENST00000402434 ELANEP08246 267 aa15.05■□□□□ -0
RTN4-207ENST00000402434 EGR2P11161 476 aaPredicted RBP15.05■□□□□ -0
RTN4-207ENST00000402434 BRWD1-AS2P59051 145 aa15.05■□□□□ -0
RTN4-207ENST00000402434 C19orf54Q5BKX5 351 aa15.05■□□□□ -0
RTN4-207ENST00000402434 MFSD4AQ8N468 514 aa15.05■□□□□ -0
RTN4-207ENST00000402434 TPSG1Q9NRR2 321 aa15.05■□□□□ -0
RTN4-207ENST00000402434 KLK11Q9UBX7 282 aa15.05■□□□□ -0
RTN4-207ENST00000402434 FBXO7Q9Y3I1 522 aa15.05■□□□□ -0
RTN4-207ENST00000402434 NUBP2Q9Y5Y2 271 aa15.05■□□□□ -0
RTN4-207ENST00000402434 TRAV41A0A0B4J266 112 aa15.04■□□□□ -0
RTN4-207ENST00000402434 G3V318 75 aa15.04■□□□□ -0
RTN4-207ENST00000402434 FCGR3BO75015 233 aa15.04■□□□□ -0
RTN4-207ENST00000402434 GNRHRP30968 328 aa15.04■□□□□ -0
RTN4-207ENST00000402434 FXYD4P59646 89 aa15.04■□□□□ -0
RTN4-207ENST00000402434 RPL23AP62750 156 aaKnown RBP15.04■□□□□ -0
RTN4-207ENST00000402434 MINDY2Q8NBR6 621 aa15.04■□□□□ -0
RTN4-207ENST00000402434 OR6F1Q8NGZ6 308 aa15.04■□□□□ -0
RTN4-207ENST00000402434 MOB3AQ96BX8 217 aa15.04■□□□□ -0
RTN4-207ENST00000402434 ZNF2Q9BSG1 426 aaPredicted RBP15.04■□□□□ -0
RTN4-207ENST00000402434 NXF2Q9GZY0 626 aaKnown RBP15.04■□□□□ -0
RTN4-207ENST00000402434 TAS2R8Q9NYW2 309 aa15.04■□□□□ -0
RTN4-207ENST00000402434 MTFP1Q9UDX5 166 aa15.04■□□□□ -0
RTN4-207ENST00000402434 WSB1Q9Y6I7 421 aa15.04■□□□□ -0
RTN4-207ENST00000402434 ZNF701M0R085 212 aaPredicted RBP15.03■□□□□ -0
RTN4-207ENST00000402434 CA2P00918 260 aa15.03■□□□□ -0
RTN4-207ENST00000402434 PSMB8P28062 276 aa15.03■□□□□ -0
RTN4-207ENST00000402434 UBE2KP61086 200 aa15.03■□□□□ -0
RTN4-207ENST00000402434 HERV-K104P61576 105 aa15.03■□□□□ -0
RTN4-207ENST00000402434 KHDC1LQ5JSQ8 128 aa15.03■□□□□ -0
RTN4-207ENST00000402434 TMEM17Q86X19 198 aa15.03■□□□□ -0
RTN4-207ENST00000402434 TEX45Q8NA69 505 aa15.03■□□□□ -0
RTN4-207ENST00000402434 OR52I2Q8NH67 350 aa15.03■□□□□ -0
RTN4-207ENST00000402434 TCTEX1D2Q8WW35 142 aa15.03■□□□□ -0
RTN4-207ENST00000402434 BORCS5Q969J3 196 aa15.03■□□□□ -0
RTN4-207ENST00000402434 CLCC1Q96S66 551 aa15.03■□□□□ -0
RTN4-207ENST00000402434 NOTCH1P46531 2555 aa15.03■□□□□ -0
RTN4-207ENST00000402434 IGLV1-40P01703 118 aa15.02■□□□□ -0
RTN4-207ENST00000402434 RPLP1P05386 114 aaKnown RBP15.02■□□□□ -0
RTN4-207ENST00000402434 SLC6A1P30531 599 aa15.02■□□□□ -0
RTN4-207ENST00000402434 SSBP2P81877 361 aaPredicted RBP15.02■□□□□ -0
RTN4-207ENST00000402434 PJVKQ0ZLH3 352 aa15.02■□□□□ -0
RTN4-207ENST00000402434 MRGPRG-AS1Q2M3A8 158 aa15.02■□□□□ -0
RTN4-207ENST00000402434 CXorf66Q5JRM2 361 aaPredicted RBP15.02■□□□□ -0
RTN4-207ENST00000402434 ZNF818PQ6ZRF7 136 aa15.02■□□□□ -0
RTN4-207ENST00000402434 OR4S2Q8NH73 311 aa15.02■□□□□ -0
RTN4-207ENST00000402434 FCAMRQ8WWV6 532 aa15.02■□□□□ -0
RTN4-207ENST00000402434 GPHA2Q96T91 129 aa15.02■□□□□ -0
RTN4-207ENST00000402434 CMYA5Q8N3K9 4069 aa15.02□□□□□ -0.01
RTN4-207ENST00000402434 GABARAPH6UMI1 98 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 TNFSF12O43508 249 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 TMEM267Q0VDI3 215 aaPredicted RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 FXYD3Q14802 87 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 VMA21Q3ZAQ7 101 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 AKIRIN2Q53H80 203 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 VAX1Q5SQQ9 334 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 TCTEX1D1Q8N7M0 179 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 DIRAS2Q96HU8 199 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 C6orf62Q9GZU0 229 aaPredicted RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 RABL2AQ9UBK7 228 aaPredicted RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 RSL24D1Q9UHA3 163 aaKnown RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 RABL2BQ9UNT1 228 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 CCDC160A6NGH7 325 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 ARPC1BO15143 372 aaKnown RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 PF4V1P10720 104 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 TBPP20226 339 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 KIR2DS2P43631 304 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 CDX1P47902 265 aaPredicted RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 MRPS10P82664 201 aaKnown RBP15.01□□□□□ -0.01
RTN4-207ENST00000402434 ACTBL2Q562R1 376 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 OR2B11Q5JQS5 317 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 LCNL1Q6ZST4 164 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 MCFD2Q8NI22 146 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 MYOZ3Q8TDC0 251 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 DCUN1D5Q9BTE7 237 aa15.01□□□□□ -0.01
RTN4-207ENST00000402434 RBFOX2O43251 390 aaKnown RBP eCLIP15□□□□□ -0.012e-9■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms