RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 F2RP25116 425 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 RND3P61587 244 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 ASAH1Q13510 395 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 OR4C13Q8NGP0 309 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 TMEM230Q96A57 120 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 FLYWCH2Q96CP2 140 aaKnown RBP12.7□□□□□ -0.38
HMGA1-204ENST00000401473 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 FLVCR2Q9UPI3 526 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 PRELID3BQ9Y3B1 194 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 OR2F2O95006 317 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 NDUFB6O95139 128 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 CRYZL1O95825 349 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 BLCAPP62952 87 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 RELBQ01201 579 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 TAGLNQ01995 201 aaKnown RBP12.7□□□□□ -0.38
HMGA1-204ENST00000401473 RBMS2Q15434 407 aaKnown RBP12.7□□□□□ -0.38
HMGA1-204ENST00000401473 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 ZNF585BQ52M93 769 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 Q6ZS46 218 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 SPAG16Q8N0X2 631 aa12.7□□□□□ -0.38
HMGA1-204ENST00000401473 STAB1Q9NY15 2570 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
HMGA1-204ENST00000401473 RPS16P62249 146 aaKnown RBP12.69□□□□□ -0.38
HMGA1-204ENST00000401473 RTL8BQ17RB0 113 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 KRTAP24-1Q3LI83 254 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 TMEM177Q53S58 311 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 Q8N9W7 124 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
HMGA1-204ENST00000401473 SH2D7A6NKC9 451 aaPredicted RBP12.68□□□□□ -0.38
HMGA1-204ENST00000401473 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 CATR1Q13166 79 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 SP6Q3SY56 376 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 C11orf88Q6PI97 169 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 NPBQ8NG41 125 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 C14orf166Q9Y224 244 aaKnown RBP12.68□□□□□ -0.38
HMGA1-204ENST00000401473 TRIM77I1YAP6 450 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 TCRBP04435 133 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 RRASP10301 218 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 AKR1C4P17516 323 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 MMDQ15546 238 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 TMED4Q7Z7H5 227 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 VKORC1L1Q8N0U8 176 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 C5orf56Q8N8D9 126 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 SCGB3A2Q96PL1 93 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 RNF5Q99942 180 aa12.68□□□□□ -0.38
HMGA1-204ENST00000401473 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
HMGA1-204ENST00000401473 SHOXO15266 292 aa12.67□□□□□ -0.38
HMGA1-204ENST00000401473 NDUFA3O95167 84 aa12.67□□□□□ -0.38
HMGA1-204ENST00000401473 S100GP29377 79 aa12.67□□□□□ -0.38
HMGA1-204ENST00000401473 SUPT4H1P63272 117 aaKnown RBP12.67□□□□□ -0.38
HMGA1-204ENST00000401473 HARBI1Q96MB7 349 aa12.67□□□□□ -0.38
HMGA1-204ENST00000401473 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 RBFOX2O43251 390 aaKnown RBP eCLIP12.66□□□□□ -0.381e-11■■□□□ 12.4
HMGA1-204ENST00000401473 LGALS7P47929 136 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 PSG5Q15238 335 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-204ENST00000401473 C16orf82Q7Z2V1 217 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 NRARPQ7Z6K4 114 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-204ENST00000401473 POC5Q8NA72 575 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 OR4S2Q8NH73 311 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 OSR1Q8TAX0 266 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-204ENST00000401473 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 MOB4Q9Y3A3 225 aa12.66□□□□□ -0.38
HMGA1-204ENST00000401473 FAM240BA0A1B0GVZ2 78 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 RNF212BA8MTL3 300 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 FCN1O00602 326 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 NBR2O15453 112 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 S1PR2O95136 353 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 IGKV1-39P01597 117 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 IGKV1D-39P04432 117 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 LPAR6P43657 344 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 CCDC71LQ8N9Z2 235 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 CD300LFQ8TDQ1 290 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 ZFAND2BQ8WV99 257 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 RAB18Q9NP72 206 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 TPSG1Q9NRR2 321 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 LIN7CQ9NUP9 197 aaKnown RBP12.65□□□□□ -0.38
HMGA1-204ENST00000401473 TEX13DA0A0J9YY54 714 aaPredicted RBP12.65□□□□□ -0.38
HMGA1-204ENST00000401473 RRHO14718 337 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 FGF16O43320 207 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 SLC25A17O43808 307 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 HPRT1P00492 218 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 CRYGBP07316 175 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 OR5AC1P0C628 307 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 KIR2DS2P43631 304 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 DHODHQ02127 395 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
HMGA1-204ENST00000401473 TMEM128Q5BJH2 165 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms