RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 Q6ZWC4 215 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 TCF23Q7RTU1 214 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 UBTD1Q9HAC8 227 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 RELBQ01201 579 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 FOXF1Q12946 379 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 CENPWQ5EE01 88 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 WDR31Q8NA23 367 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 OR10D3Q8NH80 312 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 TIMP4Q99727 224 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 SLC25A2Q9BXI2 301 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 KIAA0100Q14667 2235 aaKnown RBP8.55□□□□□ -1.04
PTPRM-203ENST00000400060 LRRC30A6NM36 301 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 PPIAL4DF5H284 164 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 CDAP32320 146 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 CAPZBP47756 277 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 TMPRSS3P57727 454 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 ZAR1Q86SH2 424 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 PERPQ96FX8 193 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 LIPT2A6NK58 231 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 GALR2O43603 387 aaPredicted RBP8.55□□□□□ -1.04
PTPRM-203ENST00000400060 ACSM6Q6P461 480 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 WDR54Q9H977 334 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 PROB1E7EW31 1015 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 LILRA1O75019 489 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 GAGE13Q4V321 117 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 TTC9CQ8N5M4 171 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 C5orf17Q8NAS9 161 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 OR2Z1Q8NG97 314 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 RAB1CQ92928 201 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 SLC25A10Q9UBX3 287 aaPredicted RBP8.55□□□□□ -1.04
PTPRM-203ENST00000400060 SERGEFQ9UGK8 458 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 MPC1Q9Y5U8 109 aa8.55□□□□□ -1.04
PTPRM-203ENST00000400060 CTGFP29279 349 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 PSG9Q00887 426 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 TMEM240Q5SV17 173 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 ASPHD2Q6ICH7 369 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 TMEM144Q7Z5S9 345 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 OR5AS1Q8N127 324 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 SLC37A2Q8TED4 501 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 TM4SF19Q96DZ7 209 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 NUP214P35658 2090 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-203ENST00000400060 F8W1H4 67 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 APOMO95445 188 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 IL15RAQ13261 267 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 ALKBH3Q96Q83 286 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-203ENST00000400060 SLC25A33Q9BSK2 321 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 CLDN14O95500 239 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 CEACAM5P06731 702 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 OR9G9P0C7N8 305 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 CCL1P22362 96 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 DUSP23Q9BVJ7 150 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 ANK1P16157 1881 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 OR2T8A6NH00 312 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 TNFSF11O14788 317 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 KIR2DL2P43627 348 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-203ENST00000400060 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-203ENST00000400060 TMEM116Q8NCL8 245 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 NFAM1Q8NET5 270 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-203ENST00000400060 OR13H1Q8NG92 308 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 MYOZ3Q8TDC0 251 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 FBXL7Q9UJT9 491 aa8.54□□□□□ -1.04
PTPRM-203ENST00000400060 LOC105371242A0A075B767 164 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 PPIAL4CA0A0B4J2A2 164 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 PPIAL4GP0DN37 164 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 RPL31P62899 125 aaKnown RBP8.53□□□□□ -1.04
PTPRM-203ENST00000400060 FAM131CQ96AQ9 280 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 IL36RNQ9UBH0 155 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 OOEPA6NGQ2 149 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 C9orf172C9J069 976 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 CSN3P07498 182 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 COL8A1P27658 744 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 FGF12P61328 243 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 ERVK11-1P61568 191 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 SLC35B1P78383 322 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF818PQ6ZRF7 136 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 NAT6Q93015 286 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 EAF1Q96JC9 268 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-203ENST00000400060 HIST1H4GQ99525 98 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
PTPRM-203ENST00000400060 MUC21A0A0G2JKD1 596 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 MUC21A0A140T8X8 626 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 SHISA7A6NL88 538 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 LMX1BO60663 402 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 PSMB2P49721 201 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 TBR1Q16650 682 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 TBC1D28Q2M2D7 210 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 MUC21Q5SSG8 566 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 CBLN3Q6UW01 205 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 RLN3Q8WXF3 142 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF414Q96IQ9 312 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 PSG11Q9UQ72 335 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF256Q9Y2P7 627 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-203ENST00000400060 ODAMA1E959 279 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 IGKV1D-16P01601 117 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 CDKN1AP38936 164 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 LGALS4P56470 323 aa8.53□□□□□ -1.04
PTPRM-203ENST00000400060 MGAT2Q10469 447 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms