RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 OR1N2Q8NGR9 330 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 SLA2Q9H6Q3 261 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 ANXA10Q9UJ72 324 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 SPATA2Q9UM82 520 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 LINC00473A8K010 186 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 ARPC1BO15143 372 aaKnown RBP11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 SHOXO15266 292 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 RAMP3O60896 148 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 LGALS1P09382 135 aaKnown RBP11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 CD40LGP29965 261 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 DGCR2P98153 550 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 FXYD3Q14802 87 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 TSPAN14Q8NG11 270 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 OSR1Q8TAX0 266 aaPredicted RBP11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 TMEM68Q96MH6 324 aa11.53□□□□□ -0.56
SMIM11A-203ENST00000399299 TRAV18A0A075B6X5 111 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 SEC14L6B5MCN3 397 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 H3BUA1 57 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 AIREO43918 545 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 TUSC2O75896 110 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 INSL3P51460 131 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 UBE2KP61086 200 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 VMA21Q3ZAQ7 101 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 OVCH2Q7RTZ1 564 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 TEX45Q8NA69 505 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 YIPF6Q96EC8 236 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 OR5B12Q96R08 314 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 DIABLOQ9NR28 239 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 TNCP24821 2201 aa11.52□□□□□ -0.57
SMIM11A-203ENST00000399299 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 CNIH1O95406 144 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 BRI3O95415 125 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 CRYZL1O95825 349 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 TPPP2P59282 170 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 KCTD9Q7L273 389 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 POC5Q8NA72 575 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 CASTOR1Q8WTX7 329 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 AUNIPQ9H7T9 357 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 SCOCQ9UIL1 159 aa11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 RBMX2Q9Y388 322 aaKnown RBP11.51□□□□□ -0.57
SMIM11A-203ENST00000399299 IGKV1D-13A0A0B4J2D9 117 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 LINC01619G3V211 115 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 IGLV2-14P01704 120 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 IGKV1-13P0DP09 117 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 CBX5P45973 191 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 ARPC4P59998 168 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 MSMO1Q15800 293 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 MRGPRG-AS1Q2M3A8 158 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 HOGA1Q86XE5 327 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 RHOVQ96L33 236 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 PRELID3BQ9Y3B1 194 aa11.5□□□□□ -0.57
SMIM11A-203ENST00000399299 J3QRK9 145 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 OVOL1O14753 267 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 XRCC3O43542 346 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 CREBL2O60519 120 aaPredicted RBP11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 TRGV3P03979 118 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 TGFBR1P36897 503 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 RPS19P39019 145 aaKnown RBP11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 EIF4EBP1Q13541 118 aaPredicted RBP11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 PRSS8Q16651 343 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 DEFB121Q5J5C9 76 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 UBE2NLQ5JXB2 153 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 GVQW1Q8N7I0 195 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
SMIM11A-203ENST00000399299 IGHV4OR15-8A0A075B7B6 117 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 A0A087WW49 117 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 A0A0G2JLM5 398 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 FCGR3BO75015 233 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 AADACP22760 399 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 CDK10Q15131 360 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 DCUN1D4Q92564 292 aa11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 DLX4Q92988 240 aaPredicted RBP11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 S100A16Q96FQ6 103 aaKnown RBP11.48□□□□□ -0.57
SMIM11A-203ENST00000399299 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 SLURP1P55000 103 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 LSM3P62310 102 aaKnown RBP11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 TNXAQ16473 311 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 IDO2Q6ZQW0 420 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 MMD2Q8IY49 270 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 OR5T1Q8NG75 326 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 OR13F1Q8NGS4 319 aa11.47□□□□□ -0.57
SMIM11A-203ENST00000399299 OR4S2Q8NH73 311 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms