RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PRRX1P54821 245 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 S1PR3Q99500 378 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PPP1R14DQ9NXH3 145 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF318Q5VUA4 2279 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 TRAV39A0A0B4J263 110 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 A0A0J9YW62 118 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 LOC101059948A0A1B0GTJ6 334 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 AMBPP02760 352 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 TDGF1P3P51864 188 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 ATP5IP56385 69 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-205ENST00000397611 FXYD3Q14802 87 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 OR2V1Q8NHB1 315 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 CLN8Q9UBY8 286 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 BPTFQ12830 3046 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 TRANK1O15050 2925 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 ATG2BQ96BY7 2078 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 A0A1B0GV72 72 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 KBTBD11O94819 623 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 FABP2P12104 132 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 EGR1P18146 543 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 NMUP48645 174 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 CCL20P78556 96 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 LCN2P80188 198 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 FBLN7Q53RD9 439 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 SPATA46Q5T0L3 261 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 ABHD3Q8WU67 409 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 LAMTOR2Q9Y2Q5 125 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 SELLP14151 372 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PMCHL1Q16048 86 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 COX19Q49B96 90 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-205ENST00000397611 VENTXO95231 258 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 TYMSP04818 313 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF883P0CG24 379 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 MUC15Q8N387 334 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 CLDND2Q8NHS1 167 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PSG11Q9UQ72 335 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 BDP1A6H8Y1 2624 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 GNB1P62873 340 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 UBE2L3P68036 154 aaKnown RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 SELENOHQ8IZQ5 122 aaKnown RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 OR8B3Q8NGG8 313 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 UBE2ZQ9H832 354 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 HS3ST3B1Q9Y662 390 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 PLCE1Q9P212 2302 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 HELTA6NFD8 242 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 H3BVH4 76 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 J3QT63 122 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 CXCL13O43927 109 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 FAM87AP0C7U9 286 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 C12orf54Q6X4T0 127 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 NUDT10Q8NFP7 164 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 WDYHV1Q96HA8 205 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 ANKHD1Q8IWZ3 2542 aaKnown RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 TRAV38-1A0A0B4J264 116 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 C2CD4DB7Z1M9 353 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 OR1D5P58170 312 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 ICAM4Q14773 271 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 LDLRAD2Q5SZI1 272 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 CXorf67Q86X51 503 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 NIT1Q86X76 327 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 CPEB3Q8NE35 698 aaKnown RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM190Q8WZ59 177 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 GALMQ96C23 342 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM140Q9NV12 185 aa4.65□□□□□ -1.66
PTPRD-205ENST00000397611 TBL2Q9Y4P3 447 aaKnown RBP4.65□□□□□ -1.66
PTPRD-205ENST00000397611 EPOPA6NHQ4 379 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 ISLRO14498 428 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 KLF7O75840 302 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 AMY1AP04745 511 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 IL11P20809 199 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 TBC1D28Q2M2D7 210 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 HES3Q5TGS1 186 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 TCF23Q7RTU1 214 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 C1QL2Q7Z5L3 287 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 CNEP1R1Q8N9A8 125 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 OR6C1Q96RD1 312 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 ABHD14AQ9BUJ0 271 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 WFDC1Q9HC57 220 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 SDF2L1Q9HCN8 221 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 TLN1Q9Y490 2541 aaKnown RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 CEP350Q5VT06 3117 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 OR4C46A6NHA9 309 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM210A6NLX4 147 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 GALR2O43603 387 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 SNAI2O43623 268 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 ZIC3O60481 467 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 CCL2P13500 99 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 KLF3P57682 345 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 SPSB3Q6PJ21 355 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 C16orf47Q6ZP98 133 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF664Q8N3J9 261 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM170AQ8WVE7 144 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 RCC1LQ96I51 464 aaKnown RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 YPEL4Q96NS1 127 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 OR2H1Q9GZK4 316 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 POLDIP2Q9Y2S7 368 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 RALGAPA1Q6GYQ0 2036 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 A0A1W2PQM1 296 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 WDR31Q8NA23 367 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms