RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CLDND2Q8NHS1 167 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 LSM10Q969L4 123 aaKnown RBP8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 WDR61Q9GZS3 305 aaKnown RBP8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 PIEZO1Q92508 2521 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 CHD8Q9HCK8 2581 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 TRGC2P03986 189 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 MYOD1P15172 320 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 SSX7Q7RTT5 188 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 FRZBQ92765 325 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 ACTR3CQ9C0K3 210 aaPredicted RBP8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 DYNLRB1Q9NP97 96 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 SPTBN4Q9H254 2564 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 PRRG2O14669 202 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 ENSAO43768 121 aaKnown RBP8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 IGHV3-48P01763 117 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 ERVK11-1P61568 191 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 RTP5Q14D33 572 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 Q6ZS49 121 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 HAPLN4Q86UW8 402 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 ODF3L1Q8IXM7 274 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 PINX1Q96BK5 328 aaKnown RBP8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 LAMP3Q9UQV4 416 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 TRAV3A0A0B4J244 114 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 P2RY6Q15077 328 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 TMEM41BQ5BJD5 291 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 SLC35E4Q6ICL7 350 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF474Q6S9Z5 364 aaPredicted RBP8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 GFRALQ6UXV0 394 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 TGIF2LYQ8IUE0 185 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 PFDN5Q99471 154 aa8.71□□□□□ -1.01
CPSF1P1-201ENST00000397477 TRGV10A0A0A0MS01 117 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 SLC31A2O15432 143 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 IGLV2-14P01704 120 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 OR9G9P0C7N8 305 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 CD82P27701 267 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 MRPS11P82912 194 aaKnown RBP8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 C10orf91Q5T1B1 145 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 C11orf53Q8IXP5 236 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 RAB24Q969Q5 203 aa8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 TNRC6AQ8NDV7 1962 aaKnown RBP8.71□□□□□ -1.02
CPSF1P1-201ENST00000397477 MKRN2OSH3BPM6 223 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 H7BYZ3 331 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 IGKV3-15P01624 115 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 GZMHP20718 246 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 EIF2S3P41091 472 aaKnown RBP8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 LRRC75BQ2VPJ9 315 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 RNF212Q495C1 297 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 ACSM6Q6P461 480 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 FAM122AQ96E09 287 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 FAM210BQ96KR6 192 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 C17orf112F2Z3M2 114 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 CXCL1P09341 107 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 MSMPQ1L6U9 139 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 KHDC3LQ587J8 217 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 GCSAMQ8N6F7 178 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 Q8WTZ3 238 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 MEGF10Q96KG7 1140 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 RHOVQ96L33 236 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 LRFN3Q9BTN0 628 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 MRPL37Q9BZE1 423 aaKnown RBP8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 CALYQ9NYX4 217 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 PTPRQQ9UMZ3 2332 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 SPG11Q96JI7 2443 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 DCHS1Q96JQ0 3298 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 IGKV1D-17A0A075B6S4 117 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 TNFSF13O75888 250 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 S100A12P80511 92 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 C9orf152Q5JTZ5 239 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 MIC13Q5XKP0 118 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 C1orf87Q8N0U7 546 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 SNX22Q96L94 193 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
CPSF1P1-201ENST00000397477 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 MGST3O14880 152 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 LY86O95711 162 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 IGHG3P01860 377 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 HSPB1P04792 205 aaKnown RBP8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 UTF1Q5T230 341 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 OR51G1Q8NGK1 321 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 TMEM37Q8WXS4 190 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 MBNL3Q9NUK0 354 aaKnown RBP8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 ZNF726P1Q15940 193 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 SSX3Q99909 188 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 RNF7Q9UBF6 113 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 TRGV8A0A0C4DH27 118 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 FAM157AC9JC47 383 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 AP4M1O00189 453 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 IGKV1D-33P01593 117 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 IGKV1-33P01594 117 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 CD1BP29016 333 aa8.69□□□□□ -1.02
CPSF1P1-201ENST00000397477 SRSF7Q16629 238 aaKnown RBP eCLIP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms