RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RNASE11Q8TAA1 199 aaKnown RBP17.13■□□□□ 0.33
CPNE1-204ENST00000397443 C18orf12Q96KH6 178 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 FYTTD1Q96QD9 318 aaKnown RBP17.13■□□□□ 0.33
CPNE1-204ENST00000397443 NEURL2Q9BR09 285 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 PDCD10Q9BUL8 212 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 SHPKQ9UHJ6 478 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 IGHV1-3A0A0C4DH29 117 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 H0YJW9 148 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 NPFFO15130 113 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 B3GALNT1O75752 331 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 KRASP01116 189 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 IGKV1-16P04430 117 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 CEACAM3P40198 252 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 AKR1C2P52895 323 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 IZUMO4Q1ZYL8 232 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 GPR157Q5UAW9 335 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 FAM71F2Q6NXP2 309 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 DYNAPQ8N1N2 210 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 APOA2P02652 100 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 EPHA1P21709 976 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 G6PCP35575 357 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 RTL8BQ17RB0 113 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 SSX9Q7RTT3 188 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 FAM219AQ8IW50 185 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 VKORC1L1Q8N0U8 176 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 LRTM2Q8N967 370 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 OR5M8Q8NGP6 311 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 ZNF436Q9C0F3 470 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-204ENST00000397443 RAB18Q9NP72 206 aa17.12■□□□□ 0.33
CPNE1-204ENST00000397443 SETXQ7Z333 2677 aaKnown RBP17.12■□□□□ 0.33
CPNE1-204ENST00000397443 IGHV1-69DA0A0B4J2H0 117 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 IFNA21P01568 189 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 IGHV1-69P01742 117 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 TRAPPC2P0DI81 140 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 TRAPPC2BP0DI82 140 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 CD300LFQ8TDQ1 290 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 OR10C1Q96KK4 312 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 OTOGQ6ZRI0 2925 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 KIR2DS2P43631 304 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 OR5AN1Q8NGI8 311 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 OR4S2Q8NH73 311 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 GSKIPQ9P0R6 139 aa17.11■□□□□ 0.33
CPNE1-204ENST00000397443 A0A0G2JRQ6 117 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 A0A1W2PPI3 338 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 SMLR1H3BR10 107 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 TIMM23O14925 209 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 CD24P25063 80 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 MINOS1Q5TGZ0 78 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 GSG1LQ6UXU4 331 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 TCTEX1D1Q8N7M0 179 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 ST6GAL2Q96JF0 529 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 SOX21Q9Y651 276 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-204ENST00000397443 MINOS1-NBL1R4GNA1 71 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 ZFHX3Q15911 3703 aa17.1■□□□□ 0.33
CPNE1-204ENST00000397443 SONP18583 2426 aaKnown RBP17.1■□□□□ 0.33
CPNE1-204ENST00000397443 J3QLI3 93 aa17.09■□□□□ 0.33
CPNE1-204ENST00000397443 HPRT1P00492 218 aa17.09■□□□□ 0.33
CPNE1-204ENST00000397443 IGKV1-5P01602 117 aa17.09■□□□□ 0.33
CPNE1-204ENST00000397443 KLF17Q5JT82 389 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-204ENST00000397443 R3HDM4Q96D70 268 aa17.09■□□□□ 0.33
CPNE1-204ENST00000397443 TBL2Q9Y4P3 447 aaKnown RBP17.09■□□□□ 0.33
CPNE1-204ENST00000397443 IAH1Q2TAA2 248 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-204ENST00000397443 IL22RA2Q969J5 263 aa17.09■□□□□ 0.33
CPNE1-204ENST00000397443 RRNAD1Q96FB5 475 aaKnown RBP17.09■□□□□ 0.33
CPNE1-204ENST00000397443 WASHC3Q9Y3C0 194 aa17.09■□□□□ 0.33
CPNE1-204ENST00000397443 MARCH11A6NNE9 402 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 TXNL1O43396 289 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 VDAC1P21796 283 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 MIDNQ504T8 468 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 DMBX1Q8NFW5 382 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 AJUBAQ96IF1 538 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 PLEKHA2Q9HB19 425 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 TMED3Q9Y3Q3 217 aa17.08■□□□□ 0.33
CPNE1-204ENST00000397443 SHOXO15266 292 aa17.08■□□□□ 0.32
CPNE1-204ENST00000397443 RBFOX2O43251 390 aaKnown RBP eCLIP17.08■□□□□ 0.327e-8■■■■□ 26.3
CPNE1-204ENST00000397443 NXPH3O95157 252 aa17.08■□□□□ 0.32
CPNE1-204ENST00000397443 FLYWCH2Q96CP2 140 aaKnown RBP17.08■□□□□ 0.32
CPNE1-204ENST00000397443 RITA1Q96K30 269 aa17.08■□□□□ 0.32
CPNE1-204ENST00000397443 HLA-GP17693 338 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 RAB13P51153 203 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 RPS16P62249 146 aaKnown RBP17.07■□□□□ 0.32
CPNE1-204ENST00000397443 LRRC37A5PQ49AS3 106 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 C22orf15Q8WYQ4 148 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 GPR146Q96CH1 333 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 MALSU1Q96EH3 234 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 HARBI1Q96MB7 349 aa17.07■□□□□ 0.32
CPNE1-204ENST00000397443 RANBP3Q9H6Z4 567 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-204ENST00000397443 FAM212BQ9NTI7 297 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-204ENST00000397443 A0A0U1RQK1 487 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 MC5RP33032 325 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 TAGLNQ01995 201 aaKnown RBP17.06■□□□□ 0.32
CPNE1-204ENST00000397443 HNF4GQ14541 408 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 NMSQ5H8A3 153 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 PDPNQ86YL7 162 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 OR8H3Q8N146 312 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 SRRM4A7MD48 611 aaKnown RBP17.06■□□□□ 0.32
CPNE1-204ENST00000397443 SCGB1D2O95969 90 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 RRASP10301 218 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 NQO2P16083 231 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 ERVK-16P61578 105 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms