RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 IL34Q6ZMJ4 242 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 TMEM252Q8N6L7 170 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SLC25A31Q9H0C2 315 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 COA4Q9NYJ1 87 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 RPUSD1Q9UJJ7 312 aaKnown RBP12.22□□□□□ -0.45
CAPN3-207ENST00000397200 JPT1Q9UK76 154 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 LINC00312Q9Y6C7 94 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-207ENST00000397200 MEX3AA1L020 520 aaKnown RBP12.21□□□□□ -0.46
CAPN3-207ENST00000397200 FAM24AA6NFZ4 105 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 F2RL2O00254 374 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 CGB3P0DN86 165 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 CGB7P0DN87 165 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 GZMHP20718 246 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 ZFP36P26651 326 aaKnown RBP12.21□□□□□ -0.46
CAPN3-207ENST00000397200 NHLH2Q02577 135 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 Q6ZRM9 215 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 LYPD6BQ8NI32 183 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 PARP11Q9NR21 331 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 CR1P17927 2039 aa12.21□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF705EA8MWA4 302 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-207ENST00000397200 C22orf46C9J442 243 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 PPP1CCP36873 323 aaKnown RBP12.2□□□□□ -0.46
CAPN3-207ENST00000397200 CATR1Q13166 79 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 TMEM200BQ69YZ2 307 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-207ENST00000397200 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF66Q6ZN08 573 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 MAPK1IP1LQ8NDC0 245 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 C8orf46Q8TAG6 207 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 CORO2AQ92828 525 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 LPAR2Q9HBW0 351 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
CAPN3-207ENST00000397200 PPIAL4CA0A0B4J2A2 164 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 A0A1W2PPH5 198 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 FAM90A26D6RGX4 464 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ITGB1BP1O14713 200 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
CAPN3-207ENST00000397200 PPIAL4GP0DN37 164 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 M6PRP20645 277 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 LPAR6P43657 344 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 RPL30P62888 115 aaKnown RBP12.19□□□□□ -0.46
CAPN3-207ENST00000397200 VAMP2P63027 116 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 PJVKQ0ZLH3 352 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF273Q14593 569 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 PXDC1Q5TGL8 231 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 BTNL8Q6UX41 500 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 TCF23Q7RTU1 214 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 EDARADDQ8WWZ3 215 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 RAB40CQ96S21 281 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 MAGT1Q9H0U3 335 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ARHGAP32A7KAX9 2087 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 YLPM1P49750 1951 aaKnown RBP12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ABCA2Q9BZC7 2435 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 B4DSR2 109 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 CHST1O43916 411 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 YPEL1O60688 119 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 MED6O75586 246 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 LIPFP07098 398 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 CAV2P51636 162 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 AKR1C2P52895 323 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF266Q14584 549 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 LY6G5BQ8NDX9 201 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 BPIFCQ8NFQ6 507 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF714Q96N38 554 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 YPEL2Q96QA6 119 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
CAPN3-207ENST00000397200 GAL3ST2Q9H3Q3 398 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 CALYQ9NYX4 217 aa12.19□□□□□ -0.46
CAPN3-207ENST00000397200 POLR3KQ9Y2Y1 108 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-207ENST00000397200 IGHV2-70DA0A0C4DH43 119 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 ZNF729A6NN14 1252 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-207ENST00000397200 WRBO00258 174 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 TXNL1O43396 289 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 FBXO24O75426 580 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 CCL3L1P16619 93 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 EPHA1P21709 976 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 LOXL3P58215 753 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 TAS2R30P59541 319 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 TMEM249Q2WGJ8 235 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
CAPN3-207ENST00000397200 LINC00574Q9H8X3 128 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 RAB9BQ9NP90 201 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 ONECUT1Q9UBC0 465 aa12.18□□□□□ -0.46
CAPN3-207ENST00000397200 MED13LQ71F56 2210 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 RAMP3O60896 148 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 SCO1O75880 301 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 MSMBP08118 114 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 RAB5CP51148 216 aa12.17□□□□□ -0.46
CAPN3-207ENST00000397200 F2RL1P55085 397 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms