RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.93□□□□□ -0.66
CLIC1-209ENST00000395892 LYRM2Q9NU23 88 aaPredicted RBP10.93□□□□□ -0.66
CLIC1-209ENST00000395892 HSPB7Q9UBY9 170 aa10.93□□□□□ -0.66
CLIC1-209ENST00000395892 FBXL17Q9UF56 701 aa10.93□□□□□ -0.66
CLIC1-209ENST00000395892 PRELID3BQ9Y3B1 194 aa10.93□□□□□ -0.66
CLIC1-209ENST00000395892 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
CLIC1-209ENST00000395892 FAM90A9PA6NNJ1 464 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 RNF223E7ERA6 249 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 SYNGR2O43760 224 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 SSSCA1O60232 199 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 IGLV1-47P01700 117 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 ARHGDIBP52566 201 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 DLX1P56177 255 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 EWSR1Q01844 656 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLIC1-209ENST00000395892 DIAPH2-AS1Q14236 149 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 POU2AF1Q16633 256 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 SP5Q6BEB4 398 aaPredicted RBP10.92□□□□□ -0.66
CLIC1-209ENST00000395892 RPL7L1Q6DKI1 246 aaKnown RBP10.92□□□□□ -0.66
CLIC1-209ENST00000395892 FAM71F2Q6NXP2 309 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 RNASE11Q8TAA1 199 aaKnown RBP10.92□□□□□ -0.66
CLIC1-209ENST00000395892 PCNPQ8WW12 178 aaKnown RBP10.92□□□□□ -0.66
CLIC1-209ENST00000395892 RAB39BQ96DA2 213 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 PHYHIPLQ96FC7 376 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 RAB40CQ96S21 281 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 AUP1Q9Y679 476 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 ARHGAP32A7KAX9 2087 aa10.92□□□□□ -0.66
CLIC1-209ENST00000395892 ZNF462Q96JM2 2506 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 FLNCQ14315 2725 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 MARCH11A6NNE9 402 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 TXNL1O43396 289 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 GAPDHP04406 335 aaKnown RBP10.91□□□□□ -0.66
CLIC1-209ENST00000395892 PVALBP20472 110 aaPredicted RBP10.91□□□□□ -0.66
CLIC1-209ENST00000395892 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
CLIC1-209ENST00000395892 LMO4P61968 165 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 GNB2P62879 340 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 PAX2Q02962 417 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 TNFRSF9Q07011 255 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 BAP18Q8IXM2 172 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 OR5AN1Q8NGI8 311 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 TMEM186Q96B77 213 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 SSBP3Q9BWW4 388 aaPredicted RBP10.91□□□□□ -0.66
CLIC1-209ENST00000395892 MRPL20Q9BYC9 149 aaKnown RBP10.91□□□□□ -0.66
CLIC1-209ENST00000395892 RBKSQ9H477 322 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 ITGB1BP2Q9UKP3 347 aa10.91□□□□□ -0.66
CLIC1-209ENST00000395892 LOC105371242A0A075B767 164 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 TRAV3A0A0B4J244 114 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 SRRM4A7MD48 611 aaKnown RBP10.9□□□□□ -0.66
CLIC1-209ENST00000395892 H0YJW9 148 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 WRBO00258 174 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 IGHV2-5P01817 119 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 LIPFP07098 398 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 NMBP08949 121 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 FAM157CP0CG43 387 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 NQO2P16083 231 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 TAS2R30P59541 319 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 UBE2KP61086 200 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 VAMP2P63027 116 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 RELBQ01201 579 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 PDLIM3Q53GG5 364 aaPredicted RBP10.9□□□□□ -0.66
CLIC1-209ENST00000395892 HCP5Q6MZN7 132 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 ZNF525Q8N782 197 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 OR4S2Q8NH73 311 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 TNFRSF14Q92956 283 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 SMIM3Q9BZL3 60 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 SLC25A31Q9H0C2 315 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 WSB1Q9Y6I7 421 aa10.9□□□□□ -0.66
CLIC1-209ENST00000395892 IGHV2-26A0A0B4J1V2 119 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 A0A1W2PPH5 198 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 CRYZL1O95825 349 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 TPT1P13693 172 aaKnown RBP10.89□□□□□ -0.67
CLIC1-209ENST00000395892 PRB3Q04118 309 aaPredicted RBP10.89□□□□□ -0.67
CLIC1-209ENST00000395892 C1orf122Q6ZSJ8 110 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 HAPLN4Q86UW8 402 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 VKORC1L1Q8N0U8 176 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 QTRT1Q9BXR0 403 aaKnown RBP10.89□□□□□ -0.67
CLIC1-209ENST00000395892 SLC25A32Q9H2D1 315 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 NARFLQ9H6Q4 476 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 ZC4H2Q9NQZ6 224 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 SLC35D1Q9NTN3 355 aa10.89□□□□□ -0.67
CLIC1-209ENST00000395892 SETXQ7Z333 2677 aaKnown RBP10.89□□□□□ -0.67
CLIC1-209ENST00000395892 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 M0R1W7 72 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 FGF16O43320 207 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 MED6O75586 246 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 JTBO76095 146 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 IGKV1-16P04430 117 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 IAPPP10997 89 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 PRRX1P54821 245 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 RPL23AP62750 156 aaKnown RBP10.88□□□□□ -0.67
CLIC1-209ENST00000395892 TAGLNQ01995 201 aaKnown RBP10.88□□□□□ -0.67
CLIC1-209ENST00000395892 ARL16Q0P5N6 197 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 HLA-DRB5Q30154 266 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 TMEM177Q53S58 311 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 FAM74A1Q5RGS3 127 aa10.88□□□□□ -0.67
CLIC1-209ENST00000395892 LDLRAD2Q5SZI1 272 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms