RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LRRC37A5PQ49AS3 106 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 NMSQ5H8A3 153 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 THOC7Q6I9Y2 204 aaKnown RBP16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 HIF1ANQ9NWT6 349 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 DPM3Q9P2X0 92 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 LY6LH3BQJ8 138 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 TXNL1O43396 289 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 EPHA1P21709 976 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 UBE2E1P51965 193 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 LGALS4P56470 323 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 Q5BKY6 102 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 ZBTB8BQ8NAP8 495 aaPredicted RBP16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 OR5AN1Q8NGI8 311 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 PPP1R1CQ8WVI7 109 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 R3HDM4Q96D70 268 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 VPS13CQ709C8 3753 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 NAV2Q8IVL1 2488 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 A0A0G2JRQ6 117 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 H0YJW9 148 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 H7C2Y5 167 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 RRASP10301 218 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 GATA3P23771 443 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 FGL1Q08830 312 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 NOXA1Q86UR1 476 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 GPR146Q96CH1 333 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 FOXC2Q99958 501 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 AUP1Q9Y679 476 aa16.54■□□□□ 0.24
VCPKMT-202ENST00000395860 G3V3Q6 166 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 LDLRAD2Q5SZI1 272 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 TPTE2P1Q5T6R2 138 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 DHRS7BQ6IAN0 325 aaPredicted RBP16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 LHFPL4Q7Z7J7 247 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 WFDC11Q8NEX6 87 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 C7orf69Q9H7B7 122 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 MMP24Q9Y5R2 645 aa16.53■□□□□ 0.24
VCPKMT-202ENST00000395860 IGHV1-3A0A0C4DH29 117 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 MARCH11A6NNE9 402 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 NQO2P16083 231 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 ERVK-16P61578 105 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 MOB3BQ86TA1 216 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 FAM219AQ8IW50 185 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 DMBX1Q8NFW5 382 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 HYLS1Q96M11 299 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 HILPDAQ9Y5L2 63 aa16.52■□□□□ 0.24
VCPKMT-202ENST00000395860 SCGB1D2O95969 90 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 PSMB6P28072 239 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 MC5RP33032 325 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 NKX2-5P52952 324 aaPredicted RBP16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 IL15RAQ13261 267 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 IZUMO4Q1ZYL8 232 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 TMEM249Q2WGJ8 235 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 MINOS1Q5TGZ0 78 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 H2BFWTQ7Z2G1 175 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 PDPNQ86YL7 162 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 WASHC3Q9Y3C0 194 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 MINOS1-NBL1R4GNA1 71 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 A0A1B0GU03 582 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 TGFAP01135 160 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 IGKV1-16P04430 117 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 SLC25A6P12236 298 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 GZMKP49863 264 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 RAB13P51153 203 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 SMCO1Q147U7 214 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 SSX9Q7RTT3 188 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 RBMXL1Q96E39 390 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 CACNG5Q9UF02 275 aa16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 TBL2Q9Y4P3 447 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-202ENST00000395860 TRAV14DV4A0A0A6YYC5 116 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 IGHV3-72A0A0B4J1Y9 119 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 CENPVL3A0A0U1RRI6 287 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 MPC2O95563 127 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 HRASP01112 189 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 IGHV4-31P0DP07 118 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 S100A10P60903 97 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 RAB32Q13637 225 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 OR11H4Q8NGC9 324 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 OR4D5Q8NGN0 318 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 FLYWCH2Q96CP2 140 aaKnown RBP16.5■□□□□ 0.23
VCPKMT-202ENST00000395860 SHOXO15266 292 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 P0C879 139 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 Q6ZRM9 215 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 FOXRED2Q8IWF2 684 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 VKORC1L1Q8N0U8 176 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 OR8H3Q8N146 312 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 OSR1Q8TAX0 266 aaPredicted RBP16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 THAP6Q8TBB0 222 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 PRRC2AP48634 2157 aaKnown RBP16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 TRAV40A0A0B4J280 105 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 A0A1W2PPI3 338 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 NPFFO15130 113 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 SSX2Q16385 188 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 MIDNQ504T8 468 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 TMEM177Q53S58 311 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 C11orf87Q6NUJ2 197 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 OR4C13Q8NGP0 309 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 RHOVQ96L33 236 aa16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 LSM5Q9Y4Y9 91 aaKnown RBP16.49■□□□□ 0.23
VCPKMT-202ENST00000395860 PDZD2O15018 2839 aa16.48■□□□□ 0.23
VCPKMT-202ENST00000395860 FXYD6-FXYD2A0A087WZ82 144 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms