RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 SLC25A17O43808 307 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 MYL9P24844 172 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 FGF9P31371 208 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-203ENST00000395453 TAGLNQ01995 201 aaKnown RBP10.42□□□□□ -0.74
SCAF11-203ENST00000395453 FXYD3Q14802 87 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 C22orf42Q6IC83 251 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 CENPOQ9BU64 300 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 OR2D2Q9H210 308 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 SLC35D1Q9NTN3 355 aa10.42□□□□□ -0.74
SCAF11-203ENST00000395453 ZNF230Q9UIE0 474 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-203ENST00000395453 HSPB1P04792 205 aaKnown RBP10.41□□□□□ -0.74
SCAF11-203ENST00000395453 SLURP1P55000 103 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 PJVKQ0ZLH3 352 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 TMEM177Q53S58 311 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 SPARTQ8N0X7 666 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 MAFIPQ8WZ33 124 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 ARPC1AQ92747 370 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 MS4A10Q96PG2 267 aa10.41□□□□□ -0.74
SCAF11-203ENST00000395453 A0A075B6Q4 140 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 IGKV1D-8A0A087WSZ0 117 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.74
SCAF11-203ENST00000395453 H3BUA1 57 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 BRI3O95415 125 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 DTYMKP23919 212 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 CD40LGP29965 261 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 H1FOOQ8IZA3 346 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-203ENST00000395453 DDB2Q92466 427 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 TMEM68Q96MH6 324 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 TXNL4BQ9NX01 149 aaKnown RBP10.4□□□□□ -0.74
SCAF11-203ENST00000395453 ELF5Q9UKW6 265 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-203ENST00000395453 SMAD5-AS1Q9Y6J3 95 aa10.4□□□□□ -0.74
SCAF11-203ENST00000395453 TNCP24821 2201 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 TRGV3P03979 118 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 RRASP10301 218 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 TPPP2P59282 170 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 ARFRP1Q13795 201 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 ARL6IP1Q15041 203 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 CDNFQ49AH0 187 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 POC5Q8NA72 575 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 BVESQ8NE79 360 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 GRPEL2Q8TAA5 225 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 GINS4Q9BRT9 223 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 YTHDF1Q9BYJ9 559 aaKnown RBP10.39□□□□□ -0.75
SCAF11-203ENST00000395453 ATG5Q9H1Y0 275 aa10.39□□□□□ -0.75
SCAF11-203ENST00000395453 SHOXO15266 292 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 SAP30O75446 220 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 CNIH1O95406 144 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 ATP6V1G2O95670 118 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 DUTP33316 252 aaKnown RBP10.38□□□□□ -0.75
SCAF11-203ENST00000395453 TALDO1P37837 337 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 RTL8BQ17RB0 113 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 XP32Q5T750 250 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 HACD4Q5VWC8 232 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 TPRA1Q86W33 373 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 OR5T1Q8NG75 326 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 HARBI1Q96MB7 349 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 DCSTAMPQ9H295 470 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 CSMD3Q7Z407 3707 aa10.38□□□□□ -0.75
SCAF11-203ENST00000395453 SMIM30A4D0T7 59 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 LINC00473A8K010 186 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 SPNP16150 400 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 UBE2KP61086 200 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 CBX3Q13185 183 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 TEX45Q8NA69 505 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 FCGR1BQ92637 280 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 ZMAT4Q9H898 229 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 RANGRFQ9HD47 186 aaPredicted RBP10.37□□□□□ -0.75
SCAF11-203ENST00000395453 STUB1Q9UNE7 303 aa10.37□□□□□ -0.75
SCAF11-203ENST00000395453 RBM7Q9Y580 266 aaKnown RBP10.37□□□□□ -0.75
SCAF11-203ENST00000395453 A0A0G2JLM5 398 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 C13orf42A0A1B0GVH6 325 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 LY86O95711 162 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 HLA-DQB1P01920 261 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 PSMB9P28065 219 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 OR6Q1Q8NGQ2 317 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 ST6GALNAC5Q9BVH7 336 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 TINAGL1Q9GZM7 467 aaPredicted RBP10.36□□□□□ -0.75
SCAF11-203ENST00000395453 ZNF355PQ9NSJ1 428 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 OR2W1Q9Y3N9 320 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
SCAF11-203ENST00000395453 MSGN1A6NI15 193 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 SCGNO76038 276 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 CRYZL1O95825 349 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 IGLV2-14P01704 120 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 GP9P14770 177 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 ZP3P21754 424 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 PITPNAQ00169 270 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 KLF5Q13887 457 aaPredicted RBP10.35□□□□□ -0.75
SCAF11-203ENST00000395453 PRSS8Q16651 343 aa10.35□□□□□ -0.75
SCAF11-203ENST00000395453 VMA21Q3ZAQ7 101 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms