RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LINC00311Q8N616 119 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 OR2C3Q8N628 320 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 C8orf31Q8N9H6 132 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 ST8SIA2Q92186 375 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 DDB2Q92466 427 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 MRPL20Q9BYC9 149 aaKnown RBP7.05□□□□□ -1.28
TDP1-203ENST00000393454 BPESC1Q9GZL8 116 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 A0A087X0M5 115 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 IGHV2-26A0A0B4J1V2 119 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 A0A1B0GX30 115 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 SYNGR2O43760 224 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 IGHV2-5P01817 119 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 IAPPP10997 89 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 NQO2P16083 231 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 ATP5J2P56134 94 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 RAB14P61106 215 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 LY6G5BQ8NDX9 201 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 TMEM186Q96B77 213 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 RBMXL1Q96E39 390 aaKnown RBP7.05□□□□□ -1.28
TDP1-203ENST00000393454 CLEC7AQ9BXN2 247 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 SLC35D1Q9NTN3 355 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 COA4Q9NYJ1 87 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 TAAR5O14804 337 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 APOA2P02652 100 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 RBP4P02753 201 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 P0C879 139 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 MMP9P14780 707 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 RPL23AP62750 156 aaKnown RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 LCN2P80188 198 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 NHLH2Q02577 135 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 DIAPH2-AS1Q14236 149 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 PNKDQ8N490 385 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 OR4A16Q8NH70 328 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 ZNF596Q8TC21 504 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 PCNPQ8WW12 178 aaKnown RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 IGFBPL1Q8WX77 278 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 FAM168AQ92567 244 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 BSCL2Q96G97 398 aaPredicted RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 RAB40CQ96S21 281 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 SLC25A31Q9H0C2 315 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 RBKSQ9H477 322 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 C11orf1Q9H5F2 150 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 SIRT7Q9NRC8 400 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 LYRM2Q9NU23 88 aaPredicted RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 FBXL17Q9UF56 701 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 KIAA1324LA8MWY0 1029 aaPredicted RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 H3BP45 60 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 ATP6V1G1O75348 118 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 MED6O75586 246 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 TMEM50AO95807 157 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 HRASP01112 189 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 ZFP36P26651 326 aaKnown RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 COL8A1P27658 744 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 OR2B8PP59922 312 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 UBE2KP61086 200 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 EWSR1Q01844 656 aaKnown RBP eCLIP7.04□□□□□ -1.28
TDP1-203ENST00000393454 TNFRSF9Q07011 255 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 MIDNQ504T8 468 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 TGIF2LXQ8IUE1 241 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 OR13D1Q8NGV5 346 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 CLDND2Q8NHS1 167 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 SCARB1Q8WTV0 552 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 NRGNQ92686 78 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 PERPQ96FX8 193 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 PIMREGQ9BSJ6 248 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 QTRT1Q9BXR0 403 aaKnown RBP7.04□□□□□ -1.28
TDP1-203ENST00000393454 CYTL1Q9NRR1 136 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 TMEM140Q9NV12 185 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 PSENENQ9NZ42 101 aa7.04□□□□□ -1.28
TDP1-203ENST00000393454 SPG11Q96JI7 2443 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 IGSF23A1L1A6 192 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 CEBPZOSA8MTT3 80 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 FAM90A26D6RGX4 464 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 M0R1W7 72 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 SHOXO15266 292 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 ENSAO43768 121 aaKnown RBP7.03□□□□□ -1.28
TDP1-203ENST00000393454 CST7O76096 145 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 IFNA17P01571 189 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 RRASP10301 218 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 PAX9P55771 341 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 SPINK9Q5DT21 86 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
TDP1-203ENST00000393454 DHRS7BQ6IAN0 325 aaPredicted RBP7.03□□□□□ -1.28
TDP1-203ENST00000393454 CLEC2AQ6UVW9 174 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 TMEM252Q8N6L7 170 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 TMEM217Q8N7C4 229 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 Q8N7P7 452 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 TNFRSF14Q92956 283 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 RHOVQ96L33 236 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
TDP1-203ENST00000393454 HSPB7Q9UBY9 170 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 TACC2O95359 2948 aa7.03□□□□□ -1.28
TDP1-203ENST00000393454 TRAV3A0A0B4J244 114 aa7.02□□□□□ -1.29
TDP1-203ENST00000393454 H0YJW9 148 aa7.02□□□□□ -1.29
TDP1-203ENST00000393454 IGKV1-16P04430 117 aa7.02□□□□□ -1.29
TDP1-203ENST00000393454 ARG1P05089 322 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms